RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CBX6O95503 412 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 RNH1P13489 461 aaKnown RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 GCAP28676 217 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TYK2P29597 1187 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 SERPINB8P50452 374 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TNFSF10P50591 281 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 PLA2G16P53816 162 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 OR4D2P58180 307 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 SLC26A5P58743 744 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 STXBP1P61764 594 aaKnown RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 ARG2P78540 354 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 IRF8Q02556 426 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 SRSF11Q05519 484 aaKnown RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 SETDB1Q15047 1291 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 ACAP2Q15057 778 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TBCCQ15814 346 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TECRLQ5HYJ1 363 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 ABHD17CQ6PCB6 329 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 QSOX2Q6ZRP7 698 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 KIF2BQ8N4N8 673 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TTLQ8NG68 377 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 HAS2Q92819 552 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 MAGEB10Q96LZ2 347 aaPredicted RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 PTCHD1Q96NR3 888 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 CSF3RQ99062 836 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 EFCAB11Q9BUY7 163 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 PITHD1Q9GZP4 211 aaPredicted RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 REXO4Q9GZR2 422 aaKnown RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 VPS11Q9H270 941 aa17.89■□□□□ 0.45
SF3A1-202ENST00000411423 FLNBO75369 2602 aaKnown RBP17.89■□□□□ 0.45
SF3A1-202ENST00000411423 TCRBV16S1A1N1A0A5B0 115 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 ANKDD1BA6NHY2 528 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 A8MUI8 341 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 POC1B-GALNT4F8VUJ3 575 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 E2F3O00716 465 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 SH3BGRLO75368 114 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 SIX3O95343 332 aaPredicted RBP17.88■□□□□ 0.45
SF3A1-202ENST00000411423 FAM153BP0C7A2 387 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 ICAM2P13598 275 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 CERS1P27544 350 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 PCDH1Q08174 1060 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 TLR1Q15399 786 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 PFKFB4Q16877 469 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 FAM153CQ494X1 144 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 NIPAL1Q6NVV3 410 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 ZNF793Q6ZN11 406 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 CRLF3Q8IUI8 442 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 FAM26EQ8N5C1 309 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 TEX9Q8N6V9 391 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 OR2L5Q8NG80 312 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 OR1N1Q8NGS0 311 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 M1APQ8TC57 530 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 ZNF473Q8WTR7 871 aaKnown RBP17.88■□□□□ 0.45
SF3A1-202ENST00000411423 MS4A8Q9BY19 250 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 CLK4Q9HAZ1 481 aaKnown RBP17.88■□□□□ 0.45
SF3A1-202ENST00000411423 MMP25Q9NPA2 562 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 PRDM7Q9NQW5 492 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 OPTCQ9UBM4 332 aa17.88■□□□□ 0.45
SF3A1-202ENST00000411423 RTCAO00442 366 aaKnown RBP17.87■□□□□ 0.45
SF3A1-202ENST00000411423 PRMT3O60678 531 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 JAK1P23458 1154 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 GSTM2P28161 218 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 PPP2R1BP30154 601 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 MSH2P43246 934 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 ZNF33BQ06732 778 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 ACTN3Q08043 901 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-202ENST00000411423 NAA30Q147X3 362 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-202ENST00000411423 FAM83EQ2M2I3 478 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 FAM219BQ5XKK7 198 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 CEP128Q6ZU80 1094 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 SCUBE1Q8IWY4 988 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 LAS2Q8IYD9 372 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 BEST3Q8N1M1 668 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 CEP112Q8N8E3 955 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 FAM47BQ8NA70 645 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 NFAM1Q8NET5 270 aaPredicted RBP17.87■□□□□ 0.45
SF3A1-202ENST00000411423 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 TAAR6Q96RI8 345 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 LPAR4Q99677 370 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 KCNK13Q9HB14 408 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 PRDM9Q9NQV7 894 aa17.87■□□□□ 0.45
SF3A1-202ENST00000411423 DYTNA2CJ06 578 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 A8MUA0 341 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 CYR61O00622 381 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 INHBAP08476 426 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 RHOXF2BP0C7M4 288 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 LIM2P55344 173 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 RAB38P57729 211 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 SKP1P63208 163 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 LAPTM5Q13571 262 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 EXT1Q16394 746 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 CCDC91Q7Z6B0 441 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 GSPT2Q8IYD1 628 aaKnown RBP17.86■□□□□ 0.45
SF3A1-202ENST00000411423 CYP4X1Q8N118 509 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 OR7G3Q8NG95 312 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 ELP5Q8TE02 316 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 FAR2Q96K12 515 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 RHOXF2Q9BQY4 288 aa17.86■□□□□ 0.45
SF3A1-202ENST00000411423 SORBS1Q9BX66 1292 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms