RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 HUNKP57058 714 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ERVFC1-1P60608 527 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 IRX4P78413 519 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 DMP1Q13316 513 aaPredicted RBP4.67□□□□□ -1.66
LSM5-206ENST00000409987 FILIP1LQ4L180 1135 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 LDLRAP1Q5SW96 308 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 SULT1C3Q6IMI6 304 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 RTN4RL2Q86UN3 420 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 LAX1Q8IWV1 398 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ZNF679Q8IYX0 411 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 DNAJC22Q8N4W6 341 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 RFLNBQ8N5W9 214 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 FAM71CQ8NEG0 241 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OR52B4Q8NGK2 314 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OR13C2Q8NGS9 318 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 OR10T2Q8NGX3 314 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 DQX1Q8TE96 717 aaKnown RBP4.67□□□□□ -1.66
LSM5-206ENST00000409987 CNOT6LQ96LI5 555 aaKnown RBP4.67□□□□□ -1.66
LSM5-206ENST00000409987 PCDHB18PQ96TA0 734 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 LAT2Q9GZY6 243 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ZNF556Q9HAH1 456 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 RAB9BQ9NP90 201 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 SPHK1Q9NYA1 384 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 DONSONQ9NYP3 566 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 CNOT2Q9NZN8 540 aaKnown RBP4.67□□□□□ -1.66
LSM5-206ENST00000409987 ATP6V1HQ9UI12 483 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 MGAT4BQ9UQ53 548 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ZNF510Q9Y2H8 683 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 NAALAD2Q9Y3Q0 740 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 ADGRL1O94910 1474 aa4.67□□□□□ -1.66
LSM5-206ENST00000409987 EIF4G3O43432 1585 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 MROH2BQ7Z745 1585 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TRAV24A0A0B4J272 114 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 XKRY2A2RUG3 117 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 BOLA2-SMG1P6H3BVE0 249 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TLX2O43763 284 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 LANCL1O43813 399 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TSHBP01222 138 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 DCTP40126 519 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 RPL21P46778 160 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 ARL16Q0P5N6 197 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 ILF2Q12905 390 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 TAF10Q12962 218 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 DDX39BQ13838 428 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 MXD4Q14582 209 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 SLC36A3Q495N2 470 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TMEM41BQ5BJD5 291 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 SUSD4Q5VX71 490 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TPGS2Q68CL5 300 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 ARHGAP17Q68EM7 881 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 PM20D1Q6GTS8 502 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 FAM166AQ6J272 317 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 ZNF843Q8N446 348 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 MAPKAPK5-AS1Q8N8E1 139 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 EIF1ADQ8N9N8 165 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 C9orf106Q8NAJ2 232 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 OR4K1Q8NGD4 311 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 FAM71F1Q96KD3 344 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 TTC25Q96NG3 672 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 EDEM2Q9BV94 578 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 FICDQ9BVA6 458 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TRMT61BQ9BVS5 477 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 CDK19Q9BWU1 502 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 PRRG4Q9BZD6 226 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 EGLN1Q9GZT9 426 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 SIRPDQ9H106 197 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 ROPN1Q9HAT0 212 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 SDR39U1Q9NRG7 319 aaPredicted RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 MRPL17Q9NRX2 175 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 NOCTQ9UK39 431 aaKnown RBP4.66□□□□□ -1.66
LSM5-206ENST00000409987 ENTPD4Q9Y227 616 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 SH3GLB1Q9Y371 365 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 MAB21L2Q9Y586 359 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 ABCC10Q5T3U5 1492 aa4.66□□□□□ -1.66
LSM5-206ENST00000409987 C15orf38-AP3S2A0A0A6YYH1 394 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 A0A1W2PN81 502 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 PIGNO95427 931 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 GAS8O95995 478 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 ITGA3P26006 1051 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 MARCKSP29966 332 aaPredicted RBP4.65□□□□□ -1.67
LSM5-206ENST00000409987 PRDX6P30041 224 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 CHRNA7P36544 502 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 NSFP46459 744 aaKnown RBP4.65□□□□□ -1.67
LSM5-206ENST00000409987 SSTP61278 116 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 UBE2HP62256 183 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 GABPB1Q06547 395 aaPredicted RBP4.65□□□□□ -1.67
LSM5-206ENST00000409987 IFT88Q13099 833 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 GK2Q14410 553 aaPredicted RBP4.65□□□□□ -1.67
LSM5-206ENST00000409987 CCDC152Q4G0S7 254 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 TECRLQ5HYJ1 363 aa4.65□□□□□ -1.67
LSM5-206ENST00000409987 C9orf50Q5SZB4 431 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms