RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SIRT5Q9NXA8 310 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 ELOVL2Q9NXB9 296 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 SLC39A1Q9NY26 324 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 OR12D3Q9UGF7 316 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 LEF1Q9UJU2 399 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-202ENST00000409915 FBXO4Q9UKT5 387 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 FZD10Q9ULW2 581 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 SLC27A6Q9Y2P4 619 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 TDRKHQ9Y2W6 561 aaKnown RBP4.4□□□□□ -1.71
SF3B1-202ENST00000409915 UTP11Q9Y3A2 253 aaKnown RBP4.4□□□□□ -1.71
SF3B1-202ENST00000409915 MFHAS1Q9Y4C4 1052 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 HYOU1Q9Y4L1 999 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 LIPGQ9Y5X9 500 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 STON1Q9Y6Q2 735 aa4.4□□□□□ -1.71
SF3B1-202ENST00000409915 IGLV3-10A0A075B6K4 115 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GOLGA8QA0A0J9YX86 632 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 FAM172BPA6NC97 362 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GOLGA8OA6NCC3 632 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 LRRC72A6NJI9 287 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 DRGXA6NNA5 263 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GOLGA8NF8WBI6 632 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 K7ERQ8 282 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CLOCKO15516 846 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 RGS10O43665 173 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 LIASO43766 372 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 KRT86O43790 486 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PEX1O43933 1283 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PAGE4O60829 102 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ATG13O75143 517 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 SLC43A1O75387 559 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CLDN11O75508 207 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 NDUFA10O95299 355 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PAPSS2O95340 614 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PSMG1O95456 288 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ECDO95905 644 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 HMGN1P05114 100 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 C8BP07358 591 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CYC1P08574 325 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CD48P09326 243 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 UBTFL6P0CB48 400 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GLB1P16278 677 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GOT1P17174 413 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 DDX5P17844 614 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 BCKDHBP21953 392 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PTPN4P29074 926 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 EPHB2P29323 1055 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 OR1E1P30953 314 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CRHR1P34998 444 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 IDUAP35475 653 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TRIM23P36406 574 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ACVRL1P37023 503 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 HSD17B3P37058 310 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ADCY8P40145 1251 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 SLC26A3P40879 764 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 MAGEA1P43355 309 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CENPAP49450 140 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 EIF2B2P49770 351 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CDK9P50750 372 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 DGKEP52429 567 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 METAP1P53582 386 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 NUP107P57740 925 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 FAM3BP58499 235 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TIRAPP58753 221 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TAS2R40P59535 323 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 GNG2P59768 71 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TPI1P60174 286 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 IFITM2Q01629 132 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ABHD18Q0P651 414 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 SEMA3BQ13214 749 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF177Q13360 481 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 APOFQ13790 326 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 CBFBQ13951 182 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 MESDQ14696 234 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 EIF4HQ15056 248 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 RGS21Q2M5E4 152 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 POM121L1PQ3SYA9 428 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 EOGTQ5NDL2 527 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 C6orf10Q5SRN2 563 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 METTL11BQ5VVY1 283 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 FAM91A1Q658Y4 838 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 HMBOX1Q6NT76 420 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 KIAA1324Q6UXG2 1013 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF704Q6ZNC4 412 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PRR23BQ6ZRT6 265 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TRMT11Q7Z4G4 463 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TAF8Q7Z7C8 310 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 FAM124AQ86V42 546 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ZC3H18Q86VM9 953 aaKnown RBP4.39□□□□□ -1.71
SF3B1-202ENST00000409915 IQCHQ86VS3 1027 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 PDSS2Q86YH6 399 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 NKAIN4Q8IVV8 208 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 TP53INP2Q8IXH6 220 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 KBTBD2Q8IY47 623 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 UNC5BQ8IZJ1 945 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 MMP21Q8N119 569 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 ARMC10Q8N2F6 343 aa4.39□□□□□ -1.71
SF3B1-202ENST00000409915 LILRA3Q8N6C8 439 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms