RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 BTN3A2P78410 334 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 HMGCS1Q01581 520 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 TBL3Q12788 808 aaKnown RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 COL9A2Q14055 689 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 DSG2Q14126 1118 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 PDCD2Q16342 344 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 AP5B1Q2VPB7 878 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 SPIN4Q56A73 249 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 ZNF793Q6ZN11 406 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 FAM47EQ6ZV65 393 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 NUDT13Q86X67 352 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 AMER3Q8N944 861 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 OR2T11Q8NH01 316 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 C19orf60Q96EN9 201 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 METTL2AQ96IZ6 378 aaKnown RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 SERINC2Q96SA4 455 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 NPLQ9BXD5 320 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 TMEM121BQ9BXQ6 578 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 MRPL1Q9BYD6 325 aaKnown RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 COPS7BQ9H9Q2 264 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 MARCOQ9UEW3 520 aaPredicted RBP15.75■□□□□ 0.11
SUMO1-208ENST00000409627 ADAM29Q9UKF5 820 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 PADI1Q9ULC6 663 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 NUP210LQ5VU65 1888 aa15.75■□□□□ 0.11
SUMO1-208ENST00000409627 A0A0G2JN53 185 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 RTCAO00442 366 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 HDAC3O15379 428 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 B3GALT2O43825 422 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 EDF1O60869 148 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 RDH16O75452 317 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 JUNP05412 331 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 KITP10721 976 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 FBLP22087 321 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 ATP5A1P25705 553 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 STAT5AP42229 794 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 PCBP4P57723 403 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 BTKQ06187 659 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 ARHGAP40Q5TG30 622 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 Q6ZSR9 355 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 COX15Q7KZN9 410 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 PAGE2Q7Z2X7 111 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 ZCCHC7Q8N3Z6 543 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 CHTF18Q8WVB6 975 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 MR1Q95460 341 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 COL26A1Q96A83 441 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 FKBP10Q96AY3 582 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 CHST8Q9H2A9 424 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 DDX31Q9H8H2 851 aaKnown RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 AKIRIN1Q9H9L7 192 aaPredicted RBP15.74■□□□□ 0.11
SUMO1-208ENST00000409627 SLC22A11Q9NSA0 550 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 RIC8BQ9NVN3 520 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 SIRT5Q9NXA8 310 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 MAP4K5Q9Y4K4 846 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 MAU2Q9Y6X3 613 aa15.74■□□□□ 0.11
SUMO1-208ENST00000409627 A0A0A6YYD5 115 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 ZNF860A6NHJ4 632 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 LSM1O15116 133 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 ALBP02768 609 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 CERS1P27544 350 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 NR6A1Q15406 480 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 SPDYAQ5MJ70 313 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 LCN10Q6JVE6 187 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 FAM198BQ6UWH4 519 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 COMMD6Q7Z4G1 85 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 WDR75Q8IWA0 830 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 CACNA2D3Q8IZS8 1091 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 ACOT4Q8N9L9 421 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 SNIP1Q8TAD8 396 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 FGF11Q92914 225 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 NKD1Q969G9 470 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 C11orf24Q96F05 449 aaPredicted RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 APIPQ96GX9 242 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 SORBS1Q9BX66 1292 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 FAM117AQ9C073 453 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 CCDC86Q9H6F5 360 aaKnown RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 MEAF6Q9HAF1 191 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 LRTM1Q9HBL6 345 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 C1orf109Q9NX04 203 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 IFT80Q9P2H3 777 aaPredicted RBP15.73■□□□□ 0.11
SUMO1-208ENST00000409627 SEC16AO15027 2179 aa15.73■□□□□ 0.11
SUMO1-208ENST00000409627 AKAP13Q12802 2813 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 IGLV3-12A0A075B6K2 115 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 TRPC5OSA6NMA1 111 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 C9J4A7 227 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 EEDO75530 441 aaKnown RBP15.72■□□□□ 0.11
SUMO1-208ENST00000409627 CD63P08962 238 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 MRPL14Q6P1L8 145 aaKnown RBP15.72■□□□□ 0.11
SUMO1-208ENST00000409627 GALNT18Q6P9A2 607 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 FAM199XQ6PEV8 388 aaPredicted RBP15.72■□□□□ 0.11
SUMO1-208ENST00000409627 OVCH1Q7RTY7 1134 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 CA13Q8N1Q1 262 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 OR5T3Q8NGG3 340 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 CT55Q8WUE5 264 aa15.72■□□□□ 0.11
SUMO1-208ENST00000409627 PPP3R2Q96LZ3 170 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms