RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRIM49BA6NDI0 452 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 LMO2P25791 158 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 FCGR2BP31994 310 aaPredicted RBP3.21□□□□□ -1.9
PMS1-203ENST00000409593 FCGR2CP31995 323 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 NAGLUP54802 743 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 ACY1Q03154 408 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 KNOP1Q1ED39 458 aaKnown RBP3.21□□□□□ -1.9
PMS1-203ENST00000409593 TCEAL6Q6IPX3 200 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 TIGD4Q8IY51 512 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 OCC1Q8TAD7 63 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 SETD6Q8TBK2 473 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 RIT1Q92963 219 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 BSCL2Q96G97 398 aaPredicted RBP3.21□□□□□ -1.9
PMS1-203ENST00000409593 GBP5Q96PP8 586 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 INTS14Q96SY0 518 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 HNRNPABQ99729 332 aaKnown RBP3.21□□□□□ -1.9
PMS1-203ENST00000409593 RBM24Q9BX46 236 aaKnown RBP3.21□□□□□ -1.9
PMS1-203ENST00000409593 UBQLN3Q9H347 655 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 TSPAN16Q9UKR8 245 aa3.21□□□□□ -1.9
PMS1-203ENST00000409593 A0A1B0GTH9 108 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 LMO7DNF2Z398 122 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 PHOX2AO14813 284 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SH3BGRLO75368 114 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 ANKRD34CP0C6C1 535 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SLC1A3P43003 542 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 PEX3P56589 373 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 EVCP57679 992 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 CNTN1Q12860 1018 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SPOUT1Q5T280 376 aaKnown RBP3.2□□□□□ -1.9
PMS1-203ENST00000409593 KLHL10Q6JEL2 608 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 C17orf107Q6ZR85 190 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 CARM1Q86X55 608 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 MARCH9Q86YJ5 346 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 RHOXF1Q8NHV9 184 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 C11orf52Q96A22 123 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 WDR41Q9HAD4 459 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 MRGBPQ9NV56 204 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 PCDHGA1Q9Y5H4 931 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 AZU1P20160 251 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 ABRQ12979 859 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 ITPK1Q13572 414 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 CDO1Q16878 200 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 ECSCRQ19T08 205 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 ARMCX4Q5H9R4 360 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 AGAP7PQ5VUJ5 663 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SLC27A4Q6P1M0 643 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 TRAT1Q6PIZ9 186 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 MEX3DQ86XN8 651 aaKnown RBP3.2□□□□□ -1.9
PMS1-203ENST00000409593 CREBRFQ8IUR6 639 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 C11orf53Q8IXP5 236 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SMYD1Q8NB12 490 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 TNFRSF13CQ96RJ3 184 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 SERINC2Q96SA4 455 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 MTIF3Q9H2K0 278 aaKnown RBP3.2□□□□□ -1.9
PMS1-203ENST00000409593 PNNQ9H307 717 aaKnown RBP3.2□□□□□ -1.9
PMS1-203ENST00000409593 FNDC4Q9H6D8 234 aaPredicted RBP3.2□□□□□ -1.9
PMS1-203ENST00000409593 ADAMTS9Q9P2N4 1935 aa3.2□□□□□ -1.9
PMS1-203ENST00000409593 C2orf92A0A1B0GVN3 265 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 ZNF840PA6NDX5 716 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 ZNF732B4DXR9 585 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 ZNF354AO60765 605 aaPredicted RBP3.19□□□□□ -1.9
PMS1-203ENST00000409593 GSK3BP49841 420 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 FOLH1Q04609 750 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 C9orf66Q5T8R8 295 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 LEMD1Q68G75 181 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 TMUB2Q71RG4 321 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 SPATA19Q7Z5L4 167 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.19□□□□□ -1.9
PMS1-203ENST00000409593 NABP1Q96AH0 204 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 ERP27Q96DN0 273 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 MINDY3Q9H8M7 445 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 SP140LQ9H930 580 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 PLEKHA3Q9HB20 300 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 ZNF107Q9UII5 783 aaPredicted RBP3.19□□□□□ -1.9
PMS1-203ENST00000409593 ZNF346Q9UL40 294 aaKnown RBP3.19□□□□□ -1.9
PMS1-203ENST00000409593 SH3GLB1Q9Y371 365 aa3.19□□□□□ -1.9
PMS1-203ENST00000409593 A0A087WWV3 80 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 K7EQG2 157 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 B4GAT1O43505 415 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 SRD5A2P31213 254 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 CRYBA2P53672 197 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 RPP38P78345 283 aaKnown RBP3.18□□□□□ -1.9
PMS1-203ENST00000409593 CETN1Q12798 172 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 TMEM44Q2T9K0 475 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 ZNF770Q6IQ21 691 aaPredicted RBP3.18□□□□□ -1.9
PMS1-203ENST00000409593 ADCK1Q86TW2 530 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 RPAINQ86UA6 219 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 THNSL1Q8IYQ7 743 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 TDHQ8IZJ6 230 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 GPD1LQ8N335 351 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 SLC43A2Q8N370 569 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 OR13C5Q8NGS8 318 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 SMPDL3AQ92484 453 aa3.18□□□□□ -1.9
PMS1-203ENST00000409593 UBE2TQ9NPD8 197 aaPredicted RBP3.18□□□□□ -1.9
PMS1-203ENST00000409593 DEPPQ9NTK1 212 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms