RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GPR151Q8TDV0 419 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 DIO2Q92813 273 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 AGAP4Q96P64 663 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TRNT1Q96Q11 434 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TCF12Q99081 682 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TSNAXQ99598 290 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CHP1Q99653 195 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 BIN3Q9NQY0 253 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PLEKHA6Q9Y2H5 1048 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 FAM149AA5PLN7 773 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 B8ZZF3 427 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 KLRC4O43908 158 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PGRP06401 933 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SNRPB2P08579 225 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PEPDP12955 493 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 LHCGRP22888 699 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 EEF1A2Q05639 463 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 ADGRG6Q86SQ4 1221 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TSEN2Q8NCE0 465 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 NEK7Q8TDX7 302 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 DNAJA4Q8WW22 397 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 KAT2AQ92830 837 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RGMAQ96B86 450 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SLC38A2Q96QD8 506 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PSD2Q9BQI7 771 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 DYNLRB1Q9NP97 96 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 LAMB4A4D0S4 1761 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CCNB2O95067 398 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CBX6O95503 412 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CRYZL1O95825 349 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 DCDP81605 110 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 BDH1Q02338 343 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SRSF5Q13243 272 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 HES5Q5TA89 166 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TMPRSS11AQ6ZMR5 421 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RNF111Q6ZNA4 994 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 ASPGQ86U10 573 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 NKD1Q969G9 470 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PTCD3Q96EY7 689 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 Q9N2J8 555 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 WHRNQ9P202 907 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PRODH2Q9UF12 536 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 NDRG3Q9UGV2 375 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 GPR160Q9UJ42 338 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RAB26Q9ULW5 256 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CCL26Q9Y258 94 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 NPEPPSL1A6NEC2 478 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 METTL12A8MUP2 240 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 ANKRD66B4E2M5 251 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 STK16O75716 305 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 GSTT2BP0CG30 244 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SRCP12931 536 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 NR2C1P13056 603 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 HOXD12P35452 270 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 FMO1Q01740 532 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SERINC3Q13530 473 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 MYBPC3Q14896 1274 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 HEPACAMQ14CZ8 416 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 C2orf76Q3KRA6 126 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 GPRC6AQ5T6X5 926 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 ZNF425Q6IV72 752 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TMEM207Q6UWW9 146 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 OR1N1Q8NGS0 311 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CPNE7Q9UBL6 633 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SNX11Q9Y5W9 270 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 HSBP1L1C9JCN9 74 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 MEN1O00255 615 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CACNG3O60359 315 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RFPL1O75677 317 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 GATBO75879 557 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 GOT2P00505 430 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SERPINE1P05121 402 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RNH1P13489 461 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 MPIP34949 423 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 CPOXP36551 454 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TTMPQ5BVD1 217 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 APTXQ7Z2E3 356 aaKnown RBP7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TFAP2BQ92481 460 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 MUCL1Q96DR8 90 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 TPD52L3Q96J77 140 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 RDH14Q9HBH5 336 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 THAP1Q9NVV9 213 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 PCDHGA6Q9Y5G7 932 aa7.04□□□□□ -1.28
SCN9A-202ENST00000409435 A0A075B6Q4 140 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 GJE1A6NN92 205 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 C5orf67F2Z3F1 127 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 J3KR12 359 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 PROCP04070 461 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 RGS19P49795 217 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 RPS14P62263 151 aaKnown RBP7.03□□□□□ -1.28
SCN9A-202ENST00000409435 RPL7AP62424 266 aaKnown RBP7.03□□□□□ -1.28
SCN9A-202ENST00000409435 KCNC4Q03721 635 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 EXOC3L2Q2M3D2 409 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 TMEM201Q5SNT2 666 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 OR52L1Q8NGH7 329 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 TERB2Q8NHR7 220 aa7.03□□□□□ -1.28
SCN9A-202ENST00000409435 CD300LFQ8TDQ1 290 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms