RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PDE9AO76083 593 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ALDOAP04075 364 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 CSTBP04080 98 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 PGAM1P18669 254 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 HOXA5P20719 270 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 CYP3A5P20815 502 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 MMP8P22894 467 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 KDELR1P24390 212 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ACRV1P26436 265 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ADORA2AP29274 412 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 HTR7P34969 479 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SOX6P35712 828 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 MAGEA3P43357 314 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 MAGEA12P43365 314 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SLC15A1P46059 708 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ATP5OP48047 213 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 CLK1P49759 484 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 AP1S2P56377 157 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PSMC6P62333 389 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 CYP4F2P78329 520 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZNF33BQ06732 778 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SLC10A2Q12908 348 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 TNK1Q13470 666 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GPR50Q13585 617 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 FRG1Q14331 258 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 SNRNP35Q16560 246 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 GEN1Q17RS7 908 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GPAT3Q53EU6 434 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ARMCX4Q5H9R4 360 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 KCNT1Q5JUK3 1230 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PLAG1Q6DJT9 500 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 FCRL6Q6DN72 434 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 C8orf82Q6P1X6 216 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZNF585AQ6P3V2 769 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 USP17L6PQ6QN14 398 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TMEM108Q6UXF1 575 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZYG11AQ6WRX3 759 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 PLEKHM3Q6ZWE6 761 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GPR142Q7Z601 462 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ADGRG5Q8IZF4 528 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TMEM132CQ8N3T6 1108 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SVOPLQ8N434 492 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TMEM35BQ8NCS4 154 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 APPL2Q8NEU8 664 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 OR8K5Q8NH50 307 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 NDNFQ8TB73 568 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 MAGEE2Q8TD90 523 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 TAS1R2Q8TE23 839 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZNF384Q8TF68 577 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ANKRD49Q8WVL7 239 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SGCDQ92629 289 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 GTF2H4Q92759 462 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 FAM149B1Q96BN6 582 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 AP2M1Q96CW1 435 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 YIPF6Q96EC8 236 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 RNF170Q96K19 258 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZNF300Q96RE9 604 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 FIZ1Q96SL8 496 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SLC46A2Q9BY10 475 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 WDR11Q9BZH6 1224 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SLIRPQ9GZT3 109 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SDCBP2Q9H190 292 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ERVMER34-1Q9H9K5 563 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 EML4Q9HC35 981 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 AGO4Q9HCK5 861 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZFP14Q9HCL3 533 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 TXNRD2Q9NNW7 524 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 NSMCE4AQ9NXX6 385 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 SCN3BQ9NY72 215 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 IL37Q9NZH6 218 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ABCD2Q9UBJ2 740 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ST6GALNAC2Q9UJ37 374 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 PCDHGB3Q9Y5G1 929 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 HSPE1-MOB4S4R3N1 261 aa5.26□□□□□ -1.57
CLK1-202ENST00000409403 CNOT1A5YKK6 2376 aaKnown RBP5.26□□□□□ -1.57
CLK1-202ENST00000409403 BCLAF3A2AJT9 711 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 METTL15A6NJ78 407 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 AQP7P3A6NL99 342 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 KCNU1A8MYU2 1149 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 EFCAB9A8MZ26 197 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 LEUTXA8MZ59 168 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 EEF2KO00418 725 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 RNASET2O00584 256 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 UBDO15205 165 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 CDK14O94921 469 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SNAP29O95721 258 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 C1QBP02746 253 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 APRTP07741 180 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ACADMP11310 421 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 TFEBP19484 476 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ATP6V1B2P21281 511 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PCMT1P22061 227 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PSMA2P25787 234 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 POLR2IP36954 125 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 GRK6P43250 576 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ABCG1P45844 678 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 YAP1P46937 504 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms