RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF19P17023 458 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 TATDN3Q17R31 274 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FBXL22Q6P050 247 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 MSANTD1Q6ZTZ1 278 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 MAVSQ7Z434 540 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ARMC10Q8N2F6 343 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ARFGAP1Q8N6T3 406 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FCAMRQ8WWV6 532 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 IMP4Q96G21 291 aaKnown RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 RPL10LQ96L21 214 aaKnown RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 CCM2Q9BSQ5 444 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ANKRD66B4E2M5 251 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 M0R036 132 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 PDHXO00330 501 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 RHCEP18577 417 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 BEX3Q00994 111 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 MBOAT1Q6ZNC8 495 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 SIAH1Q8IUQ4 282 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 LYSMD2Q8IV50 215 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 NETO1Q8TDF5 533 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 IFT46Q9NQC8 304 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 NOP16Q9Y3C1 178 aaKnown RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 HS3ST4Q9Y661 456 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FAM72CH0Y354 149 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 CH25HO95992 272 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 AGTR1P30556 359 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 APLP1P51693 650 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FAM72AQ5TYM5 149 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FAM72DQ6L9T8 149 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 DHRS4L2Q6PKH6 230 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 FAM72BQ86X60 149 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 NEUROD4Q9HD90 331 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 BAZ2AQ9UIF9 1905 aaKnown RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF3P17036 446 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ABRAXAS2Q15018 415 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 OR4D1Q15615 310 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 VTCN1Q7Z7D3 282 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 NXPE1Q8N323 547 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 SLC5A8Q8N695 610 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 TMEM174Q8WUU8 243 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 ELL3Q9HB65 397 aaPredicted RBP17.05■□□□□ 0.32
SMPD4-202ENST00000409031 GTF2IRD1Q9UHL9 959 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 CAMTA1Q9Y6Y1 1673 aa17.05■□□□□ 0.32
SMPD4-202ENST00000409031 TTC34A8MYJ7 566 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 CTDSP2O14595 271 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 RB1P06400 928 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 IL3P08700 152 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 ACVR2AP27037 513 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 FCGRTP55899 365 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 B3GNT8Q7Z7M8 397 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 RPL3LQ92901 407 aaKnown RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 HSPA12BQ96MM6 686 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 NIPAL2Q9H841 368 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 DUXAA6NLW8 204 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 CHP2O43745 196 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 ENDOUP21128 410 aaKnown RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 DNASE1L1P49184 302 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 UAP1L1Q3KQV9 507 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 USP41Q3LFD5 358 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 RAB6CQ53S08 254 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 PLAG1Q6DJT9 500 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 GET4Q7L5D6 327 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SGCDQ92629 289 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 S100PBPQ96BU1 408 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 MCCC1Q96RQ3 725 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 RAB6CQ9H0N0 254 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 GPR45Q9Y5Y3 372 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 JRKO75564 520 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SCAPQ12770 1279 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 TAZQ16635 292 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 ZMIZ2Q8NF64 920 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 CXorf40AQ8TE69 158 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 IL12RB2Q99665 862 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 OR51I1Q9H343 314 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 PCTPQ9UKL6 214 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SULT1C4O75897 302 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 ADAP00813 363 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 ZNF14P17017 642 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 EDNRAP25101 427 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 GGT2P36268 569 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 UGT2B10P36537 528 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SLC30A6Q6NXT4 461 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 IQCHQ86VS3 1027 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SNIP1Q8TAD8 396 aaKnown RBP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 CYP2S1Q96SQ9 504 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMPD4-202ENST00000409031 NDUFAF4Q9P032 175 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
SMPD4-202ENST00000409031 SLC25A12O75746 678 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 RASGRP1O95267 797 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 AVPR1BP47901 424 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 MAN2A2P49641 1150 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 CNIH2Q6PI25 160 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 OR52B6Q8NGF0 335 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 KXD1Q9BQD3 176 aa17.03■□□□□ 0.32
SMPD4-202ENST00000409031 ADARB2Q9NS39 739 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms