RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 RCHY1Q96PM5 261 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PCDHB18PQ96TA0 734 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PINK1Q9BXM7 581 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 HES7Q9BYE0 225 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 RIMS4Q9H426 269 aaPredicted RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PLSCR3Q9NRY6 295 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 IARS2Q9NSE4 1012 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 OLAHQ9NV23 265 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 HAO2Q9NYQ3 351 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 PPIEQ9UNP9 301 aaKnown RBP0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 ABCG2Q9UNQ0 655 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 MOKQ9UQ07 419 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 CPQQ9Y646 472 aa0.71□□□□□ -2.3
MIR548I3-201ENST00000408378 KIR2DS1A0A191URI9 304 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 A6NCN8 305 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ZFP92A6NM28 416 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 A8MV72 311 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ANHXE9PGG2 379 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 EPB41L2O43491 1005 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SCO2O43819 266 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 DOK2O60496 412 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ZBED4O75132 1171 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TSPAN9O75954 239 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ANGPTL1O95841 491 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 IGHG3P01860 377 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ABCB1P08183 1280 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 MYL6BP14649 208 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 GOT1P17174 413 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 EPORP19235 508 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 AZGP1P25311 298 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CTNNA2P26232 953 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 RPL9P32969 192 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 PCGF2P35227 344 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 HOXD13P35453 343 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 EIF2DP41214 584 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SLC1A6P48664 564 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 HMGCS2P54868 508 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 UBASH3AP57075 661 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CXCL6P80162 114 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CHAF1BQ13112 559 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CRMP1Q14194 572 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 KIR2DS1Q14954 304 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 KIAA0040Q15053 153 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TGIF1Q15583 401 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 C17orf58Q2M2W7 97 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 RFTN2Q52LD8 501 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 LACTB2Q53H82 288 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 C6orf163Q5TEZ5 329 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 NAA16Q6N069 864 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 DHRS11Q6UWP2 260 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ZBTB49Q6ZSB9 765 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 Q71RC1 249 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ANKRD33Q7Z3H0 272 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TRMT11Q7Z4G4 463 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CAMKMTQ7Z624 323 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 PIGWQ7Z7B1 504 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TLK2Q86UE8 772 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 DNAAF5Q86Y56 855 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 FBXO16Q8IX29 292 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 RNF175Q8N4F7 328 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CARNMT1Q8N4J0 409 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TTC30BQ8N4P2 665 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TC2NQ8N9U0 490 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 BEST4Q8NFU0 473 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SETD7Q8WTS6 366 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 FAF2Q96CS3 445 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 PGM2Q96G03 612 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 MAGEB18Q96M61 343 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TIGD1Q96MW7 591 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SPATA33Q96N06 139 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ANKRD27Q96NW4 1050 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ALKBH3Q96Q83 286 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 ABHD1Q96SE0 405 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 HSD17B14Q9BPX1 270 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CHCHD6Q9BRQ6 235 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 NTN4Q9HB63 628 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 NMUR1Q9HB89 426 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 PIH1D3Q9NQM4 214 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 PHPT1Q9NRX4 125 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 TBC1D22BQ9NU19 505 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 MRPL15Q9P015 296 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 CPSF2Q9P2I0 782 aaKnown RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 DBF4Q9UBU7 674 aaPredicted RBP0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SLC12A6Q9UHW9 1150 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 SATB2Q9UPW6 733 aa0.7□□□□□ -2.3
MIR548I3-201ENST00000408378 MUC6Q6W4X9 2439 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 COL5A1P20908 1838 aaPredicted RBP0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 IGHV3-35A0A0C4DH35 117 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 EDDM13A0A1B0GTR0 161 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 FRG2CA6NGY1 282 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 E5RGE8 158 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 MCF2LO15068 1137 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 KIF5CO60282 957 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 APBB3O95704 486 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 ACTL6AO96019 429 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 MT-ND2P03891 347 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 STAG3L1P0CL83 205 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 SKILP12757 684 aa0.69□□□□□ -2.3
MIR548I3-201ENST00000408378 NR2C1P13056 603 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms