RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 REEP3Q6NUK4 255 aa4.8□□□□□ -1.64
HDAC9-204ENST00000406451 CHERPQ8IWX8 916 aaKnown RBP4.8□□□□□ -1.64
HDAC9-204ENST00000406451 LNX2Q8N448 690 aa4.8□□□□□ -1.64
HDAC9-204ENST00000406451 OR6C4Q8NGE1 309 aa4.8□□□□□ -1.64
HDAC9-204ENST00000406451 TMCO6Q96DC7 493 aa4.8□□□□□ -1.64
HDAC9-204ENST00000406451 CLEC4MQ9H2X3 399 aaPredicted RBP4.8□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM184CQ9NVA4 438 aa4.8□□□□□ -1.64
HDAC9-204ENST00000406451 CACNA1CQ13936 2221 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TMEM265A0A087WTH1 108 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SLC30A4O14863 429 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PRODHO43272 600 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HCRTR2O43614 444 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ITM2AO43736 263 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SOX30O94993 753 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 UQCRC2P22695 453 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TIA1P31483 386 aaKnown RBP eCLIP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RORAP35398 523 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 AFF3P51826 1226 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NR1H2P55055 460 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CDK3Q00526 305 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GRIN2CQ14957 1233 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HSF5Q4G112 596 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF550Q7Z398 422 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GPAT4Q86UL3 456 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 LRRC25Q8N386 305 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 LINC00471Q8N535 108 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DTD2Q96FN9 168 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FAM53CQ9NYF3 392 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MAN2B2Q9Y2E5 1009 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TPRP12270 2363 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NPIPB15A6NHN6 443 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 G6PDP11413 515 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CD1DP15813 335 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GABRA3P34903 492 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RPS9P46781 194 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CLEC12AQ5QGZ9 265 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF678Q5SXM1 525 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NOXRED1Q6NXP6 359 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 IGDCC3Q8IVU1 814 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CBR4Q8N4T8 237 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ASB15Q8WXK1 588 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PKP4Q99569 1192 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TTYH1Q9H313 450 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MARCH5Q9NX47 278 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GIN1Q9NXP7 522 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TVP23BQ9NYZ1 205 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MARK1Q9P0L2 795 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RGPD4Q7Z3J3 1758 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FAM149AA5PLN7 773 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NPIPA2E9PIF3 369 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NPIPA3F8WFD2 350 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 EIF3FO00303 357 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SCO2O43819 266 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ANGPTL1O95841 491 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PSMA1P25786 263 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FAUP35544 74 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 UFM1P61960 85 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SLC18A2Q05940 514 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SMAD4Q13485 552 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF846Q147U1 533 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FER1L6Q2WGJ9 1857 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ALKAL1Q6UXT8 129 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GALNT12Q8IXK2 581 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TP53INP1Q96A56 240 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ZSWIM3Q96MP5 696 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RNF38Q9H0F5 515 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 UBE2ZQ9H832 354 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ENTPD2Q9Y5L3 495 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SPTA1P02549 2419 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HAT1O14929 419 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PDYNP01213 254 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TACSTD2P09758 323 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 HOXD9P28356 352 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CBX5P45973 191 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 SLC18A1P54219 525 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 KLHL22Q53GT1 634 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TMEFF1Q8IYR6 380 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 NR4A3Q92570 626 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DSN1Q9H410 356 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TPT1P8Q9HAU6 139 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 GPRC5BQ9NZH0 403 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 MARCH4Q9P2E8 410 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DAPK2Q9UIK4 370 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PLCL2Q9UPR0 1127 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 DAPL1A0PJW8 107 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PSMD9O00233 223 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 OPN1SWP03999 348 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 EDN1P05305 212 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CREB1P16220 341 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 BMP8BP34820 402 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 CLCN2P51788 898 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 RAB41Q5JT25 222 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 ANKRD26P1Q6NSI1 321 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PNCKQ6P2M8 343 aa4.79□□□□□ -1.64
HDAC9-204ENST00000406451 PARS2Q7L3T8 475 aaKnown RBP4.79□□□□□ -1.64
HDAC9-204ENST00000406451 BMP8AQ7Z5Y6 402 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms