RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 DNAJA4Q8WW22 397 aaPredicted RBP15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 PYCR2Q96C36 320 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 CDCA5Q96FF9 252 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 ZCCHC4Q9H5U6 513 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 PLCL2Q9UPR0 1127 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 RNF6Q9Y252 685 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 DHRS7Q9Y394 339 aa15.6■□□□□ 0.09
COL4A3BP-204ENST00000405807 GBF1Q92538 1859 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 MTMR11A4FU01 709 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 FFAR3O14843 346 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 GPR42O15529 346 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 TLL1O43897 1013 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 LIPAP38571 399 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 HSPA7P48741 367 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 CYP4F8P98187 520 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 PRKCDQ05655 676 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 PUDPQ08623 228 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 GRB14Q14449 540 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 POU4F3Q15319 338 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 PRAMEF19Q5SWL8 479 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 SBSNQ6UWP8 590 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 TRIM46Q7Z4K8 759 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 LNX2Q8N448 690 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 SIGLEC11Q96RL6 698 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 ZNF490Q9ULM2 529 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 TFECO14948 347 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 WDR47O94967 919 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 HTR3BO95264 441 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 S100A3P33764 101 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 CTSKP43235 329 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 PIK3CGP48736 1102 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 MRPS6P82932 125 aaKnown RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 SLC39A12Q504Y0 691 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 MIB1Q86YT6 1006 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 C10orf111Q8N326 155 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 PARP16Q8N5Y8 322 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 ASZ1Q8WWH4 475 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 NUAK2Q9H093 628 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 SHARPINQ9H0F6 387 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 SPNS1Q9H2V7 528 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 TTYH1Q9H313 450 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 ADARB2Q9NS39 739 aaKnown RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 CPA4Q9UI42 421 aa15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 FNDC3AQ9Y2H6 1198 aaKnown RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 TRIP12Q14669 1992 aaPredicted RBP15.59■□□□□ 0.09
COL4A3BP-204ENST00000405807 IQCF5A8MTL0 148 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 HOXA9P31269 272 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 LRRC26Q2I0M4 334 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 USP39Q53GS9 565 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 SGO1Q5FBB7 561 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 CDKL4Q5MAI5 379 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 SDHAF4Q5VUM1 108 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 LAMTOR1Q6IAA8 161 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 PDE12Q6L8Q7 609 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 IKBIPQ70UQ0 350 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 KRT73Q86Y46 540 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 STK40Q8N2I9 435 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 YIPF7Q8N8F6 280 aa15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 MRPL48Q96GC5 212 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 MS4A7Q9GZW8 240 aaPredicted RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 NXF2Q9GZY0 626 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 NSUN3Q9H649 340 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 ZFR2Q9UPR6 939 aaKnown RBP15.58■□□□□ 0.09
COL4A3BP-204ENST00000405807 WWP2O00308 870 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 STX7O15400 261 aaKnown RBP15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 INSIG1O15503 277 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 WBP4O75554 376 aaKnown RBP15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 MED26O95402 600 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 GLUD1P00367 558 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 FABP3P05413 133 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 HMBSP08397 361 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 OR4Q2P0C623 313 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 TYMPP19971 482 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 ELP6Q0PNE2 266 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 RGL4Q8IZJ4 473 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 CLHC1Q8NHS4 586 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 DNAJC11Q9NVH1 559 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 GUCA1CO95843 209 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 TBX18O95935 607 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 BCKDHAP12694 445 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 HOXA6P31267 233 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 RNF4P78317 190 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 NPRL3Q12980 569 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 ERV3-1Q14264 604 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 SMAD2Q15796 467 aaKnown RBP15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 DUSP6Q16828 381 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 LPCAT1Q8NF37 534 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 ELP4Q96EB1 424 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 SUSD3Q96L08 255 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 ZNF285Q96NJ3 590 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 PITX2Q99697 317 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 LDAHQ9H6V9 325 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 BPIFA1Q9NP55 256 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 SERHLQ9NQF3 203 aa15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 SAMHD1Q9Y3Z3 626 aaKnown RBP15.58■□□□□ 0.08
COL4A3BP-204ENST00000405807 TAPBPO15533 448 aa15.57■□□□□ 0.08
COL4A3BP-204ENST00000405807 PCDHGA12O60330 932 aa15.57■□□□□ 0.08
COL4A3BP-204ENST00000405807 APBB3O95704 486 aa15.57■□□□□ 0.08
COL4A3BP-204ENST00000405807 GADD45AP24522 165 aa15.57■□□□□ 0.08
COL4A3BP-204ENST00000405807 EPHA2P29317 976 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms