RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PCDHGB7Q9Y5F8 929 aa18.11■□□□□ 0.49
RTN4-207ENST00000402434 OR2W5A6NFC9 320 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 A6NL46 340 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 PDGFAP04085 211 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 C8orf89P0DMQ9 161 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 COX6A1P12074 109 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 RNH1P13489 461 aaKnown RBP18.1■□□□□ 0.49
RTN4-207ENST00000402434 IMPDH1P20839 514 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CCNG1P51959 295 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 PRKAA2P54646 552 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 RHAGQ02094 409 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 TGM3Q08188 693 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 IFFO1Q0D2I5 559 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 C19orf57Q0VDD7 668 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 NFATC3Q12968 1075 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 RUNX2Q13950 521 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 MYBPC3Q14896 1274 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CPSF6Q16630 551 aaKnown RBP eCLIP18.1■□□□□ 0.49
RTN4-207ENST00000402434 DEPDC1Q5TB30 811 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 FAAH2Q6GMR7 532 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CHSY3Q70JA7 882 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 NDUFAF7Q7L592 441 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 UBE3DQ7Z6J8 389 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CA13Q8N1Q1 262 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 PLPP5Q8NEB5 264 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 WDR20Q8TBZ3 569 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 ATP6V1E2Q96A05 226 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 REPS1Q96D71 796 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CMTM7Q96FZ5 175 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 CDK15Q96Q40 435 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 MTERF1Q99551 399 aaKnown RBP18.1■□□□□ 0.49
RTN4-207ENST00000402434 SMAD5Q99717 465 aaKnown RBP18.1■□□□□ 0.49
RTN4-207ENST00000402434 NUDT9Q9BW91 350 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 SEMA4BQ9NPR2 832 aaPredicted RBP18.1■□□□□ 0.49
RTN4-207ENST00000402434 PSD3Q9NYI0 1048 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 GPR83Q9NYM4 423 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 BSNQ9UPA5 3926 aa18.1■□□□□ 0.49
RTN4-207ENST00000402434 IGHV1-45A0A0A0MS14 117 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 A0A0G2JN53 185 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 B8ZZF3 427 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 G3V2L1 256 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 TGFB1P01137 390 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 JAK1P23458 1154 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 MTTPP55157 894 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 CCDC153Q494R4 210 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 GGTA1PQ4G0N0 100 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 ZNF678Q5SXM1 525 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 MFSD4BQ5TF39 518 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 KHDRBS2Q5VWX1 349 aaKnown RBP18.09■□□□□ 0.49
RTN4-207ENST00000402434 ASB18Q6ZVZ8 466 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 RPS27LQ71UM5 84 aaKnown RBP18.09■□□□□ 0.49
RTN4-207ENST00000402434 METTL21AQ8WXB1 218 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 SERINC2Q96SA4 455 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 TBCDQ9BTW9 1192 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 ZNF700Q9H0M5 742 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 DMRT3Q9NQL9 472 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 PPT2Q9UMR5 302 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 G3BP2Q9UN86 482 aaKnown RBP18.09■□□□□ 0.49
RTN4-207ENST00000402434 ZNF462Q96JM2 2506 aa18.09■□□□□ 0.49
RTN4-207ENST00000402434 CNTRLQ7Z7A1 2325 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 NSG1A0A0A6YYJ2 146 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 A0A1B0GTL3 188 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 MAGEB17A8MXT2 336 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 FOXE1O00358 373 aaPredicted RBP18.08■□□□□ 0.49
RTN4-207ENST00000402434 PPP6CO00743 305 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 B3GALT2O43825 422 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 PLIN3O60664 434 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 CDC123O75794 336 aaPredicted RBP18.08■□□□□ 0.49
RTN4-207ENST00000402434 OTCP00480 354 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 PROCP04070 461 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 PGDP52209 483 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 ARFIP1P53367 373 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 CDH13P55290 713 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 Q0VFX4 171 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 ZRSR2Q15696 482 aaKnown RBP18.08■□□□□ 0.49
RTN4-207ENST00000402434 UNC50Q53HI1 259 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 C10orf62Q5T681 223 aaPredicted RBP18.08■□□□□ 0.49
RTN4-207ENST00000402434 MILR1Q7Z6M3 343 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 TRABD2AQ86V40 505 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 L3HYPDHQ96EM0 354 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 IMMP1LQ96LU5 166 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 MAGEB10Q96LZ2 347 aaPredicted RBP18.08■□□□□ 0.49
RTN4-207ENST00000402434 TMEM237Q96Q45 408 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 RBCK1Q9BYM8 510 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 ROGDIQ9GZN7 287 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 PLAAQ9Y263 795 aa18.08■□□□□ 0.49
RTN4-207ENST00000402434 SCN2AQ99250 2005 aa18.08■□□□□ 0.48
RTN4-207ENST00000402434 FAM227AF5H4B4 570 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 COPEO14579 308 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 KLHL41O60662 606 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 SUPT7LO94864 414 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 SCELO95171 688 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 NR1D1P20393 614 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 PTX3P26022 381 aaPredicted RBP18.07■□□□□ 0.48
RTN4-207ENST00000402434 CLCQ05315 142 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 CUL3Q13618 768 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 DDX39BQ13838 428 aaKnown RBP18.07■□□□□ 0.48
RTN4-207ENST00000402434 ABRAXAS2Q15018 415 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 PCOLCEQ15113 449 aa18.07■□□□□ 0.48
RTN4-207ENST00000402434 NSDHLQ15738 373 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms