RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PTPN13Q12923 2485 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 TRAV17A0A0B4J275 112 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 ANKDD1BA6NHY2 528 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 PRMT3O60678 531 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 RNH1P13489 461 aaKnown RBP14.88□□□□□ -0.03
ATG4B-203ENST00000400772 CASP2P42575 452 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 SLC26A5P58743 744 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 CHIT1Q13231 466 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 TBCCQ15814 346 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 ACER2Q5QJU3 275 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 ABHD17BQ5VST6 288 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 ZNF324BQ6AW86 544 aaPredicted RBP14.88□□□□□ -0.03
ATG4B-203ENST00000400772 LRRC70Q7Z2Q7 622 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 ST6GALNAC3Q8NDV1 305 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 UBTD2Q8WUN7 234 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 CCT6BQ92526 530 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 MAGEB10Q96LZ2 347 aaPredicted RBP14.88□□□□□ -0.03
ATG4B-203ENST00000400772 GPR78Q96P69 363 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 REXO4Q9GZR2 422 aaKnown RBP14.88□□□□□ -0.03
ATG4B-203ENST00000400772 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.88□□□□□ -0.032e-8■□□□□ 9
ATG4B-203ENST00000400772 CDC42EP4Q9H3Q1 356 aaKnown RBP14.88□□□□□ -0.03
ATG4B-203ENST00000400772 KCNK13Q9HB14 408 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 PRDM9Q9NQV7 894 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 CLDN16Q9Y5I7 305 aa14.88□□□□□ -0.03
ATG4B-203ENST00000400772 USP9XQ93008 2570 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 A0A087X1B8 175 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 TCRBV16S1A1N1A0A5B0 115 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 OR5H15A6NDH6 313 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 SUPT3HB4E1H0 165 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ERI3O43414 337 aaKnown RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 SUPT3HO75486 399 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ALDOAP04075 364 aaKnown RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 S100BP04271 92 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 PHBP35232 272 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ST13P50502 369 aaKnown RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 PLA2G16P53816 162 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 PCDH1Q08174 1060 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 UAP1Q16222 522 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ABHD17CQ6PCB6 329 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 UBE3DQ7Z6J8 389 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 CRLF3Q8IUI8 442 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 BEST3Q8N1M1 668 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 TMEM52Q8NDY8 209 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 NFAM1Q8NET5 270 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 OR2L5Q8NG80 312 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 RHEBL1Q8TAI7 183 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ELP5Q8TE02 316 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 IFT81Q8WYA0 676 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 FAR2Q96K12 515 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ZNF354BQ96LW1 612 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 F2RL3Q96RI0 385 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 SLX1AQ9BQ83 275 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 EFCAB11Q9BUY7 163 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 NPLQ9BXD5 320 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 PRDM7Q9NQW5 492 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 MTRF1LQ9UGC7 380 aaKnown RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 TEKT2Q9UIF3 430 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 ERRFI1Q9UJM3 462 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-203ENST00000400772 HIVEP3Q5T1R4 2406 aa14.87□□□□□ -0.03
ATG4B-203ENST00000400772 PRRC2CQ9Y520 2896 aaKnown RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 A0A096LPK6 155 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 PSMD12O00232 456 aaPredicted RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 KLHL2O95198 593 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 ACSL3O95573 720 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 UQCRHP07919 91 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 CTAGE8P0CG41 777 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 EDN3P14138 238 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 HNRNPFP52597 415 aaKnown RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 RAB38P57729 211 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 IRF8Q02556 426 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 LAPTM5Q13571 262 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 ACAP2Q15057 778 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 MEP1AQ16819 746 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 GLE1Q53GS7 698 aaKnown RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 CCDC91Q7Z6B0 441 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 SCUBE1Q8IWY4 988 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 CTAGE4Q8IX94 777 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 PLD6Q8N2A8 252 aaKnown RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 KIF2BQ8N4N8 673 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 MNS1Q8NEH6 495 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 ZNF473Q8WTR7 871 aaKnown RBP14.86□□□□□ -0.03
ATG4B-203ENST00000400772 SSC4DQ8WTU2 575 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 SLC44A1Q8WWI5 657 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 POLEQ07864 2286 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 LRRK2Q5S007 2527 aa14.86□□□□□ -0.03
ATG4B-203ENST00000400772 WIPF3A6NGB9 483 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 SAGE2PA6NJ88 616 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 A8MUA0 341 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 TGFBR3LH3BV60 316 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 K7EPI3 171 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 CYR61O00622 381 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 KLK8O60259 260 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 PRAMEF2O60811 474 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 TUBB4AP04350 444 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 TYK2P29597 1187 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 CD96P40200 585 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 MSH2P43246 934 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 MAGEA12P43365 314 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 TDGF1P3P51864 188 aa14.85□□□□□ -0.03
ATG4B-203ENST00000400772 LIM2P55344 173 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms