RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPANXN4Q5MJ08 99 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 AGTRAPQ6RW13 159 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.282e-8■■□□□ 13.9
VAPA-202ENST00000400000 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 ACTL7AQ9Y615 435 aa13.29□□□□□ -0.28
VAPA-202ENST00000400000 MTMR11A4FU01 709 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 XRCC1P18887 633 aaPredicted RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 RABL3Q5HYI8 236 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 ZC3H14Q6PJT7 736 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 DPY19L4Q7Z388 723 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 TAMM41Q96BW9 452 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 GPR88Q9GZN0 384 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 SH2B3Q9UQQ2 575 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 DNM1LO00429 736 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 NUAK1O60285 661 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 C18orf21Q32NC0 220 aaPredicted RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 OR9A1PQ8NGU1 263 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 FZD8Q9H461 694 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 KAT8Q9H7Z6 458 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 ABCD2Q9UBJ2 740 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 LOC100130705A0A1B0GUX0 176 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 FAM221BA6H8Z2 402 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 GALTP07902 379 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 UNGP13051 313 aaPredicted RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 NTHL1P78549 312 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 EXOC3L2Q2M3D2 409 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 MTFR2Q6P444 385 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 SYCE2Q6PIF2 218 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 ZNF100Q8IYN0 542 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 PEX11GQ96HA9 241 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 EIF2B3Q9NR50 452 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 MYADML2A6NDP7 307 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 AGPSO00116 658 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 KDELR3O43731 214 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 BRINP1O60477 761 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 RNGTTO60942 597 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 HNF1BP35680 557 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 PNLIPRP1P54315 467 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 DEFB134Q4QY38 66 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 PDSS1Q5T2R2 415 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 OR51G2Q8NGK0 314 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 GEMIN6Q8WXD5 167 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 NSUN5Q96P11 429 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 LRRC3Q9BY71 257 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 KCNK12Q9HB15 430 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 MAN2C1Q9NTJ4 1040 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 TSPAN6O43657 245 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 AHSA1O95433 338 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 IFNA21P01568 189 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 DNAJA1P31689 397 aaKnown RBP13.28□□□□□ -0.28
VAPA-202ENST00000400000 SLAMF1Q13291 335 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 HHIPQ96QV1 700 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 ATG5Q9H1Y0 275 aa13.28□□□□□ -0.28
VAPA-202ENST00000400000 CSF2P04141 144 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 BCKDHAP12694 445 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 CD97P48960 835 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 ZXDBP98169 803 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 TPRG1LQ5T0D9 272 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 TMEM236Q5W0B7 351 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 GLIS1Q8NBF1 620 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 OR51A7Q8NH64 312 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 EPYCQ99645 322 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.28
VAPA-202ENST00000400000 GLS2Q9UI32 602 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 SCML2Q9UQR0 700 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 RAD1O60671 282 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 SNHG28P0DPA3 235 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 SMSP52788 366 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 FOXK1P85037 733 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 RFTN1Q14699 578 aaPredicted RBP13.27□□□□□ -0.28
VAPA-202ENST00000400000 KIAA0930Q6ICG6 404 aaPredicted RBP13.27□□□□□ -0.28
VAPA-202ENST00000400000 LRFN4Q6PJG9 635 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 LRRC57Q8N9N7 239 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 ACDQ96AP0 544 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 CLDN25C9JDP6 229 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 K7ERQ8 282 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 NDUFS1P28331 727 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 MERTKQ12866 999 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 LMAN2Q12907 356 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 ANKDD1AQ495B1 522 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 PNPLA2Q96AD5 504 aa13.27□□□□□ -0.28
VAPA-202ENST00000400000 A0A0U1RQF3 1178 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 PEPDP12955 493 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 ELK4P28324 431 aa13.27□□□□□ -0.29
VAPA-202ENST00000400000 EEFSECP57772 596 aaKnown RBP13.27□□□□□ -0.29
VAPA-202ENST00000400000 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms