RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TMEM132CQ8N3T6 1108 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 D2HGDHQ8N465 521 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 SRFBP1Q8NEF9 429 aaKnown RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 KLHL6Q8WZ60 621 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 RCN3Q96D15 328 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 QRFPRQ96P65 431 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 TBCDQ9BTW9 1192 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 DDX31Q9H8H2 851 aaKnown RBP20.13■□□□□ 0.81
CPNE1-204ENST00000397443 SIRT5Q9NXA8 310 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 FBXW2Q9UKT8 454 aa20.13■□□□□ 0.81
CPNE1-204ENST00000397443 COL5A1P20908 1838 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 FAM234BA2RU67 622 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 PLIN5Q00G26 463 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 SLAMF1Q13291 335 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 MAPRE2Q15555 327 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 MMEL1Q495T6 779 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 SPANXN4Q5MJ08 99 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 TMTC4Q5T4D3 741 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 TMEM214Q6NUQ4 689 aaKnown RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 SPDL1Q96EA4 605 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 SEMA5BQ9P283 1151 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 CROCCQ5TZA2 2017 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 A0A0A6YYD5 115 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 NTN3O00634 580 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 GP1BAP07359 652 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 ALOX12P18054 663 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 ASMTP46597 345 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 MRPL19P49406 292 aaKnown RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 OLR1P78380 273 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 C2orf80Q0P641 193 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 RCAN2Q14206 197 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 RINLQ6ZS11 566 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 ARHGAP22Q7Z5H3 698 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 OR7A2PQ8NGA2 310 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 TMEM74Q96NL1 305 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 TUBB6Q9BUF5 446 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 SLC25A23Q9BV35 468 aa20.12■□□□□ 0.81
CPNE1-204ENST00000397443 TEX10Q9NXF1 929 aaPredicted RBP20.12■□□□□ 0.81
CPNE1-204ENST00000397443 CCDC154A6NI56 674 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 B2RBV5 119 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 OR2B3O76000 313 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 COX7A2P14406 83 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 PRDX6P30041 224 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 ALDH9A1P49189 494 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 IRX1P78414 480 aaPredicted RBP20.11■□□□□ 0.81
CPNE1-204ENST00000397443 FOXM1Q08050 763 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 SLC9A5Q14940 896 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 HERC3Q15034 1050 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 PRAMEF17Q5VTA0 474 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 KMT5CQ86Y97 462 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 FAM9CQ8IZT9 166 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 OR1L3Q8NH93 324 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 CLMPQ9H6B4 373 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 FGF21Q9NSA1 209 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 NAALAD2Q9Y3Q0 740 aa20.11■□□□□ 0.81
CPNE1-204ENST00000397443 FBP2O00757 339 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 ANGPT2O15123 496 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 TOX3O15405 576 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 DNAJB6O75190 326 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 MED26O95402 600 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 FAM58BPP0C7Q3 252 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PRPS1L1P21108 318 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 NUDT2P50583 147 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 CLDN6P56747 220 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 NCALDP61601 193 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PRTGQ2VWP7 1150 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 YTHDF3Q7Z739 585 aaKnown RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PDSS2Q86YH6 399 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 SLITRK4Q8IW52 837 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 RIMKLAQ8IXN7 391 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 METTL27Q8N6F8 245 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 TM4SF18Q96CE8 201 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 DPYSL5Q9BPU6 564 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 CHRNA10Q9GZZ6 450 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 MYNNQ9NPC7 610 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PDP2Q9P2J9 529 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 ADAM29Q9UKF5 820 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PCNX2A6NKB5 2137 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 SCN2AQ99250 2005 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 PRKRAO75569 313 aaKnown RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 EFNA1P20827 205 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 HPCAL1P37235 193 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 CLNS1AP54105 237 aaKnown RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 MTTPP55157 894 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 UGT8Q16880 541 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 LACTB2Q53H82 288 aaPredicted RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 REP15Q6BDI9 236 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 FAM180BQ6P0A1 224 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 ASCL5Q7RTU5 278 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 SHISA5Q8N114 240 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 EFCAB3Q8N7B9 438 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 OR9A4Q8NGU2 314 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 CDC6Q99741 560 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 IL1RL2Q9HB29 575 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 SH3BP4Q9P0V3 963 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 C5AR2Q9P296 337 aa20.1■□□□□ 0.81
CPNE1-204ENST00000397443 EXO1Q9UQ84 846 aaKnown RBP20.1■□□□□ 0.81
CPNE1-204ENST00000397443 GVINP1Q7Z2Y8 2422 aa20.09■□□□□ 0.81
CPNE1-204ENST00000397443 FAM186AA6NE01 2351 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms