RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 APLFQ8IW19 511 aaPredicted RBP14.24□□□□□ -0.13
CAPN3-207ENST00000397200 MARVELD2Q8N4S9 558 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 OR2L3Q8NG85 312 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 FLVCR1-AS1Q8TAF5 88 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CANT1Q8WVQ1 401 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 LRTOMTQ8WZ04 291 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 TESCQ96BS2 214 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 ZDHHC12Q96GR4 267 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 TMEM74Q96NL1 305 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CCDC115Q96NT0 180 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 TRIM8Q9BZR9 551 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 RAB33BQ9H082 229 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 ABCG4Q9H172 646 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 SYNDIG1Q9H7V2 258 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 EPHA6Q9UF33 1036 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 EGFL7Q9UHF1 273 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 SH2B3Q9UQQ2 575 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 DLGAP4Q9Y2H0 992 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 PCDHB3Q9Y5E6 796 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CROCCQ5TZA2 2017 aa14.24□□□□□ -0.13
CAPN3-207ENST00000397200 CAPN5O15484 640 aaPredicted RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 TNFSF14O43557 240 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 GFRA3O60609 400 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 KCNH1O95259 989 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 LYNP07948 512 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 UMPSP11172 480 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CDH1P12830 882 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SDC1P18827 310 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 HRH2P25021 359 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 HNF4AP41235 474 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 C21orf58P58505 322 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CCL7P80098 99 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 IRF8Q02556 426 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 MED21Q13503 144 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 FAM174BQ3ZCQ3 159 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 XKR6Q5GH73 641 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SPANXN4Q5MJ08 99 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 LRIF1Q5T3J3 769 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 USP53Q70EK8 1073 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 PIP4P1Q86T03 277 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 TMPRSS11BQ86T26 416 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 TRIM73Q86UV7 250 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 PROSER1Q86XN7 944 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 PLXDC1Q8IUK5 500 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 RIMKLAQ8IXN7 391 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 TGM7Q96PF1 710 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 LRRN3Q9H3W5 708 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CUEDC1Q9NWM3 386 aaPredicted RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 MAGEL2Q9UJ55 1249 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 AP3M1Q9Y2T2 418 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 UNC13CQ8NB66 2214 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 A0A0J9YY10 115 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 HNRNPRO43390 633 aaKnown RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CDH3P22223 829 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 PSMA4P25789 261 aaKnown RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 GFERP55789 205 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 FOLH1Q04609 750 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SELPLGQ14242 412 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CATSPEREQ5SY80 951 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 KIAA1614Q5VZ46 1190 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 TMEM154Q6P9G4 183 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 WDR74Q6RFH5 385 aaPredicted RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 NXPE4Q6UWF7 544 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SLCO4C1Q6ZQN7 724 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 FAM92BQ6ZTR7 304 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 ADCK2Q7Z695 626 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SPPL2CQ8IUH8 684 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 FAM20CQ8IXL6 584 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 MSRB3Q8IXL7 192 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 KRTCAP2Q8N6L1 136 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 NUDT8Q8WV74 236 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 WDR34Q96EX3 536 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 C11orf24Q96F05 449 aaPredicted RBP14.23□□□□□ -0.13
CAPN3-207ENST00000397200 ZNF597Q96LX8 424 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 CD180Q99467 661 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 VCXQ9H320 206 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 YY1AP1Q9H869 796 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 PELI2Q9HAT8 420 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 BRF2Q9HAW0 419 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 VAPAQ9P0L0 249 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 SCOCQ9UIL1 159 aa14.23□□□□□ -0.13
CAPN3-207ENST00000397200 HEATR5BQ9P2D3 2071 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 RIF1Q5UIP0 2472 aaKnown RBP14.22□□□□□ -0.13
CAPN3-207ENST00000397200 A0A1W2PQM1 296 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 H7BY64 318 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 PRMT3O60678 531 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 CPNE6O95741 557 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 C1GALT1C1LP0DN25 315 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 CSF2RBP32927 897 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 CCR8P51685 355 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 NEK2P51955 445 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 SQSTM1Q13501 440 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 DOC2AQ14183 400 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 MAPKAPK3Q16644 382 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 MTX3Q5HYI7 312 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 ATG9BQ674R7 924 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 OR52E8Q6IFG1 317 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 ABHD11Q8NFV4 315 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 NETO1Q8TDF5 533 aa14.22□□□□□ -0.13
CAPN3-207ENST00000397200 MTFMTQ96DP5 389 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms