RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PARP9Q8IXQ6 854 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 ZADH2Q8N4Q0 377 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 SNX31Q8N9S9 440 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 ANKRD53Q8N9V6 530 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 RHEBL1Q8TAI7 183 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 NXNL1Q96CM4 212 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 MOCOSQ96EN8 888 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 AGAP4Q96P64 663 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 GPR78Q96P69 363 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 SLC6A16Q9GZN6 736 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 RIC8BQ9NVN3 520 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 HCN3Q9P1Z3 774 aa13.76□□□□□ -0.21
SEC13-208ENST00000397109 TTLL8A6PVC2 850 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 FOXO6A8MYZ6 492 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 MASP2O00187 686 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 BIRC5O15392 142 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 GALR3O60755 368 aaPredicted RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 RDH16O75452 317 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 C8orf89P0DMQ9 161 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 COX6A1P12074 109 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 ICAM2P13598 275 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 VARSP26640 1264 aaKnown RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 KCNC1P48547 511 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 STXBP1P61764 594 aaKnown RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 IRF9Q00978 393 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 LAPTM5Q13571 262 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 SLBPQ14493 270 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEC13-208ENST00000397109 ACAP2Q15057 778 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 TSNAXIP1Q2TAA8 658 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 MFSD4BQ5TF39 518 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 FAAH2Q6GMR7 532 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 JMJD6Q6NYC1 403 aaPredicted RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 RBMXL3Q8N7X1 1067 aaKnown RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 KCTD4Q8WVF5 259 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 EXT2Q93063 718 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 PNPLA2Q96AD5 504 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 THOC3Q96J01 351 aaKnown RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 ATOH8Q96SQ7 321 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 CD244Q9BZW8 370 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 VN1R1Q9GZP7 353 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 ZNF160Q9HCG1 818 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 COPG2Q9UBF2 871 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 C19orf25Q9UFG5 118 aaPredicted RBP13.75□□□□□ -0.21
SEC13-208ENST00000397109 MYO18BQ8IUG5 2567 aa13.75□□□□□ -0.21
SEC13-208ENST00000397109 IGHV1-45A0A0A0MS14 117 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ANKDD1BA6NHY2 528 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SUPT3HB4E1H0 165 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 CCNT2O60583 730 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 GLRA3O75311 464 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SUPT3HO75486 399 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ZNF888P0CJ79 500 aaPredicted RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 GMPRP36959 345 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 AGTR2P50052 363 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 FOXK1P85037 733 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 MINDY4Q4G0A6 757 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 DEFB134Q4QY38 66 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 PAGE2BQ5JRK9 111 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 COLEC12Q5KU26 742 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 RIPOR1Q6ZS17 1223 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 PLD6Q8N2A8 252 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 UTP15Q8TED0 518 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 CREB3L4Q8TEY5 395 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 WDR34Q96EX3 536 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 EFCAB11Q9BUY7 163 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ZNF700Q9H0M5 742 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 CLMPQ9H6B4 373 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SLAMF7Q9NQ25 335 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 PYCARD-AS1I3L0S3 204 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 JRKO75564 520 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 CLEC3AO75596 197 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 TGDSO95455 350 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SERPINA7P05543 415 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SMIM10L1P0DMW3 83 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 IRF8Q02556 426 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 EEF1A2Q05639 463 aaKnown RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 TBCCQ15814 346 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 HIST2H2ACQ16777 129 aaPredicted RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 FBXO48Q5FWF7 155 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 XKR6Q5GH73 641 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 TOR1AIP1Q5JTV8 583 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ATG16L1Q676U5 607 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 HIST2H2AA3Q6FI13 130 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.74□□□□□ -0.215e-6■■■■■ 55.7
SEC13-208ENST00000397109 GBP7Q8N8V2 638 aaPredicted RBP13.74□□□□□ -0.21
SEC13-208ENST00000397109 PLPP5Q8NEB5 264 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 UBTD2Q8WUN7 234 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 TBC1D20Q96BZ9 403 aa13.74□□□□□ -0.21
SEC13-208ENST00000397109 PEX11GQ96HA9 241 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms