RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LCLAT1Q6UWP7 414 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 ZSWIM9Q86XI8 627 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 DCUN1D3Q8IWE4 304 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 TNFAIP8L1Q8WVP5 186 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 BTN2A2Q8WVV5 523 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 ESAMQ96AP7 390 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 AP2M1Q96CW1 435 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 RHOVQ96L33 236 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 C10orf90Q96M02 699 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 BTBD1Q9H0C5 482 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 SDHAF3Q9NRP4 125 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 DZANK1Q9NVP4 752 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 CXXC1Q9P0U4 656 aaPredicted RBP8.13□□□□□ -1.11
NDE1-202ENST00000396355 ZMYM5Q9UJ78 669 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 MRTO4Q9UKD2 239 aaKnown RBP8.13□□□□□ -1.11
NDE1-202ENST00000396355 FBXL21Q9UKT6 434 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 CRYL1Q9Y2S2 319 aa8.13□□□□□ -1.11
NDE1-202ENST00000396355 POLR3HQ9Y535 204 aaPredicted RBP8.13□□□□□ -1.11
NDE1-202ENST00000396355 PDCD11Q14690 1871 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 MYADML2A6NDP7 307 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 KRBOX1C9JBD0 128 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 NPIPA7E9PJI5 369 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 H0YAE9 185 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 TCAPO15273 167 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 MOCS2O96007 188 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 ZNF286BP0CG31 522 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 NPIPA8P0DM63 369 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PGAM1P18669 254 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 S100A7P31151 101 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ALDH9A1P49189 494 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 LIMK2P53671 638 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CAV3P56539 151 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 IDNKQ5T6J7 187 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PDZD4Q76G19 769 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 JAZF1Q86VZ6 243 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ZNF671Q8TAW3 534 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ZNF69Q9UC07 566 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 MUTYHQ9UIF7 546 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 FAM50BQ9Y247 325 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PCDHB5Q9Y5E4 795 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 TNPO3Q9Y5L0 923 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 BRWD1Q9NSI6 2320 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 FAM95CA0A1B0GW59 222 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 LYRM1O43325 122 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PTP4A3O75365 173 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 TRIM3O75382 744 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 RP2O75695 350 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 SYPP08247 313 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ACPPP15309 386 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 LHCGRP22888 699 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PRKCHP24723 683 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 FPR3P25089 353 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ST3GAL4Q11206 333 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 MAMDC4Q6UXC1 1216 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 WFIKKN2Q8TEU8 576 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 MUL1Q969V5 352 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 MED18Q9BUE0 208 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 NFKBIZQ9BYH8 718 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ASF1BQ9NVP2 202 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 GPR83Q9NYM4 423 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PTGFRNQ9P2B2 879 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 DNAJB9Q9UBS3 223 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 TRHDEQ9UKU6 1024 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PCDHGB2Q9Y5G2 931 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ZNF705GA8MUZ8 300 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 AGPAT2O15120 278 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CYTIPO60759 359 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 POP7O75817 140 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 DARSP14868 501 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 PAMP19021 973 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ATP5F1P24539 256 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 ITGB8P26012 769 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 APEX1P27695 318 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 CSTF2P33240 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
NDE1-202ENST00000396355 PIGAP37287 484 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ARHGAP1Q07960 439 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CBLBQ13191 982 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CTF1Q16619 201 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 EXOC3L2Q2M3D2 409 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CERCAMQ5T4B2 595 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 VASNQ6EMK4 673 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CXorf57Q6NSI4 855 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 TEX261Q6UWH6 196 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 CLEC9AQ6UXN8 241 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 USP30Q70CQ3 517 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 LRRTM3Q86VH5 581 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 ANKRD46Q86W74 232 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 FAM131BQ86XD5 332 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 KAT2AQ92830 837 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 AURKBQ96GD4 344 aaPredicted RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 SIGLEC10Q96LC7 697 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 DCLRE1CQ96SD1 692 aaKnown RBP8.12□□□□□ -1.11
NDE1-202ENST00000396355 NPAS1Q99742 590 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 FUZQ9BT04 418 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 TRIM62Q9BVG3 475 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 RNF32Q9H0A6 362 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms