RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RANBP9Q96S59 729 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 NUDT15Q9NV35 164 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 EXOSC1Q9Y3B2 195 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PROM1O43490 865 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 RNF13O43567 381 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TLX2O43763 284 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MTX2O75431 263 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AHSA1O95433 338 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GSK3BP49841 420 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GDI2P50395 445 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PER3P56645 1201 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OR2B6P58173 313 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 RAB39AQ14964 217 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TPRG1LQ5T0D9 272 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 NOXRED1Q6NXP6 359 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KLHDC10Q6PID8 442 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OR2T33Q8NG76 320 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FKBP10Q96AY3 582 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KCNH6Q9H252 994 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MARCH7Q9H992 704 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CMAHPQ9Y471 501 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KDM4BO94953 1096 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FESP07332 822 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AKR1D1P51857 326 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DGKQP52824 942 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 DCDC1P59894 354 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SEMG2Q02383 582 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 WSCD2Q2TBF2 565 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ATG9BQ674R7 924 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 GPAT4Q86UL3 456 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 OR5P2Q8WZ92 322 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KIAA1143Q96AT1 154 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 RBP7Q96R05 134 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TMPRSS11EQ9UL52 423 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CDH10Q9Y6N8 788 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 LEPRP48357 1165 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PLP2Q04941 152 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 LMX1AQ8TE12 382 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FCAMRQ8WWV6 532 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 FRMD6Q96NE9 622 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MVB12BQ9H7P6 319 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 TMLHEQ9NVH6 421 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MTMR10Q9NXD2 777 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ARID1BQ8NFD5 2236 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 J3QLW9 94 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 PPM1BO75688 479 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF19P17023 458 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MAB21L1Q13394 359 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 IRF5Q13568 498 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 AAK1Q2M2I8 961 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ARHGAP12Q8IWW6 846 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 CHERPQ8IWX8 916 aaKnown RBP5.27□□□□□ -1.57
VPS13C-204ENST00000395898 NLGN2Q8NFZ4 835 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ARHGAP39Q9C0H5 1083 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 SFXN1Q9H9B4 322 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 MLXQ9UH92 298 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 KCNIP3Q9Y2W7 256 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 ECM29Q5VYK3 1845 aa5.27□□□□□ -1.57
VPS13C-204ENST00000395898 A0A1B0GUL6 1792 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 COCHO43405 550 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 OR7A10O76100 309 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GSRP00390 522 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GLDCP23378 1020 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ACADVLP49748 655 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 AP2S1P53680 142 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CDK10Q15131 360 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ITPRIPL2Q3MIP1 535 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SCGB2B2Q4G0G5 96 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM198Q66K66 360 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TXNRD3NBQ6F5E7 133 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ARL9Q6T311 187 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CLDN19Q8N6F1 224 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PSD4Q8NDX1 1056 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MMABQ96EY8 250 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 IMP4Q96G21 291 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 RAD9AQ99638 391 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MROQ9BYG7 248 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CACNG4Q9UBN1 327 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 RNF11Q9Y3C5 154 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 WNT6Q9Y6F9 365 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM14AQ9Y6G1 99 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 COL2A1P02458 1487 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TOPAZ1Q8N9V7 1692 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CCDC88CQ9P219 2028 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 A0A096LPI6 279 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 A0A0G2JN53 185 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FAM170BA6NMN3 283 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 BHMG1C9JSJ3 638 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CCRL2O00421 344 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 HEXBP07686 556 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GPR143P51810 404 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 RPS15AP62244 130 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CYBRD1Q53TN4 286 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC27A4Q6P1M0 643 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 UNC5DQ6UXZ4 953 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CYS1Q717R9 158 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 NSUN3Q9H649 340 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FBRSQ9HAH7 460 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms