RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CYP2R1Q6VVX0 501 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 IKBIPQ70UQ0 350 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 R3HCC1LQ7Z5L2 792 aaKnown RBP18.41■□□□□ 0.54
LMNB1-202ENST00000395354 VPS37AQ8NEZ2 397 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 OR7A2PQ8NGA2 310 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 MTERF3Q96E29 417 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 CCDC115Q96NT0 180 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 PRAP1Q96NZ9 151 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 MS4A8Q9BY19 250 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 REXO4Q9GZR2 422 aaKnown RBP18.41■□□□□ 0.54
LMNB1-202ENST00000395354 MRPS30Q9NP92 439 aaKnown RBP18.41■□□□□ 0.54
LMNB1-202ENST00000395354 ARMC1Q9NVT9 282 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 BTNL2Q9UIR0 455 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 PADI4Q9UM07 663 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
LMNB1-202ENST00000395354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.4■□□□□ 0.54
LMNB1-202ENST00000395354 RFXANKO14593 260 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 SH3BP5O60239 455 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 SCN2BO60939 215 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 UMPSP11172 480 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 PTPN6P29350 595 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 CMPK1P30085 196 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 GRIA3P42263 894 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 GSTM5P46439 218 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 WNT3P56703 355 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 MTPNP58546 118 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 MAP7Q14244 749 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 NR0B2Q15466 257 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 TAF11Q15544 211 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 CPTPQ5TA50 214 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 AMIGO1Q86WK6 493 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 IFNEQ86WN2 208 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 TBC1D19Q8N5T2 526 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 ANKRD53Q8N9V6 530 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 LCN9Q8WX39 176 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 GFM2Q969S9 779 aaKnown RBP18.4■□□□□ 0.54
LMNB1-202ENST00000395354 ZNF583Q96ND8 569 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 QRFPRQ96P65 431 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 CPPED1Q9BRF8 314 aaPredicted RBP18.4■□□□□ 0.54
LMNB1-202ENST00000395354 THUMPD3Q9BV44 507 aaKnown RBP18.4■□□□□ 0.54
LMNB1-202ENST00000395354 DUSP26Q9BV47 211 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 SARGQ9BW04 601 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 TRIM8Q9BZR9 551 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 TWSG1Q9GZX9 223 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 REEP4Q9H6H4 257 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 LRIT1Q9P2V4 623 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 EGFL7Q9UHF1 273 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 RIMS3Q9UJD0 308 aa18.4■□□□□ 0.54
LMNB1-202ENST00000395354 GABRR3A8MPY1 467 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 NUDT21O43809 227 aaKnown RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 SH3BGRLO75368 114 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 CLEC3AO75596 197 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 CAPNS1P04632 268 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 GPIP06744 558 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 ACADSP16219 412 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 GLB1P16278 677 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 GRK3P35626 688 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 PLIN5Q00G26 463 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 SELPLGQ14242 412 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 GPR18Q14330 331 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 SF1Q15637 639 aaKnown RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 HKDC1Q2TB90 917 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 PROX2Q3B8N5 592 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 MTX3Q5HYI7 312 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 OGFRL1Q5TC84 451 aaPredicted RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 PAGE2Q7Z2X7 111 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 NAXDQ8IW45 347 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 RBM12BQ8IXT5 1001 aaKnown RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 CATSPER1Q8NEC5 780 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 OR2L3Q8NG85 312 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 C16orf78Q8WTQ4 265 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 SLC22A18Q96BI1 424 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 ZNF184Q99676 751 aaPredicted RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 CENPKQ9BS16 269 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 KLHL4Q9C0H6 718 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 BHLHE41Q9C0J9 482 aaPredicted RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 CCM2LQ9NUG4 571 aaPredicted RBP18.39■□□□□ 0.53
LMNB1-202ENST00000395354 ATAD3AQ9NVI7 634 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 GMEB1Q9Y692 573 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 RNF215Q9Y6U7 377 aa18.39■□□□□ 0.53
LMNB1-202ENST00000395354 IGKV1-8A0A0C4DH67 115 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 LY6G6EA0A0G2JKS1 128 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CPED1A4D0V7 1026 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 RHPN2P1A8MT19 583 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 PDE7AQ13946 482 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 TRIP10Q15642 601 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 FAM71E1Q6IPT2 247 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 TMEM26Q6ZUK4 368 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ZNF761Q86XN6 746 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 SPPL2CQ8IUH8 684 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 CDC26Q8NHZ8 85 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 WDR48Q8TAF3 677 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 POP5Q969H6 163 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 SLCO4A1Q96BD0 722 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 INPP5KQ9BT40 448 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 KAT8Q9H7Z6 458 aaKnown RBP18.38■□□□□ 0.53
LMNB1-202ENST00000395354 ADAM29Q9UKF5 820 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 SNX7Q9UNH6 387 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 U3KQA8 63 aa18.38■□□□□ 0.53
LMNB1-202ENST00000395354 DHRS12A0PJE2 317 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms