RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ARMC1Q9NVT9 282 aa19.4■□□□□ 0.7
PRKCD-202ENST00000394729 A0A1W2PRB8 838 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 F3P13726 295 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 CERS1P27544 350 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 SLC5A12Q1EHB4 618 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 TSSK4Q6SA08 328 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 UBE3DQ7Z6J8 389 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 ZC3H7AQ8IWR0 971 aaKnown RBP19.39■□□□□ 0.7
PRKCD-202ENST00000394729 KLHDC8AQ8IYD2 350 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 FAM9CQ8IZT9 166 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 ABHD11Q8NFV4 315 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 OR2L8Q8NGY9 312 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 YIPF4Q9BSR8 244 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 RHBGQ9H310 441 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 RMI1Q9H9A7 625 aa19.39■□□□□ 0.7
PRKCD-202ENST00000394729 FAM120CQ9NX05 1096 aaKnown RBP19.39■□□□□ 0.7
PRKCD-202ENST00000394729 KCNK5O95279 499 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 BSGP35613 385 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 PIK3CBP42338 1070 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 SFSWAPQ12872 951 aaKnown RBP19.39■□□□□ 0.69
PRKCD-202ENST00000394729 RAB8BQ92930 207 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 FBXL20Q96IG2 436 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 SMURF2Q9HAU4 748 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 MAN2B2Q9Y2E5 1009 aa19.39■□□□□ 0.69
PRKCD-202ENST00000394729 E2F6O75461 281 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 GPIP06744 558 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 CD6P30203 668 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 MANFP55145 182 aaKnown RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 REEP5Q00765 189 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 GPR153Q6NV75 609 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 FCRL1Q96LA6 429 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 GPATCH2Q9NW75 528 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 WSB2Q9NYS7 404 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 USP36Q9P275 1121 aaKnown RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 PADI4Q9UM07 663 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 FAF1Q9UNN5 650 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 CASC3O15234 703 aaKnown RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 ZW10O43264 779 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 DNAJB6O75190 326 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 CXCR2P25025 360 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 OR1E2P47887 323 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 RNF220Q5VTB9 566 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 C18orf63Q68DL7 685 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 KIAA0895LQ68EN5 471 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 FAM71E1Q6IPT2 247 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 SPESP1Q6UW49 350 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 SMYD1Q8NB12 490 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 SLC37A2Q8TED4 501 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 TMBIM1Q969X1 311 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 SPATA7Q9P0W8 599 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 UNC13CQ8NB66 2214 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 LRIT2A6NDA9 550 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 SNAP29O95721 258 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 CCT8P50990 548 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 KIAA1024LP59773 190 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 EIF2B5Q13144 721 aaKnown RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 TP53BP2Q13625 1128 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 TOR1AIP1Q5JTV8 583 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 IRGCQ6NXR0 463 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 TM4SF18Q96CE8 201 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 CENPNQ96H22 339 aaPredicted RBP19.38■□□□□ 0.69
PRKCD-202ENST00000394729 KIR3DX1Q9H7L2 352 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 MVB12BQ9H7P6 319 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 WASH6PQ9NQA3 447 aa19.38■□□□□ 0.69
PRKCD-202ENST00000394729 TTC28Q96AY4 2481 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 PRAMEF26H0Y7S4 382 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 PGRMC2O15173 223 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 NDUFS2O75306 463 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 JUNDP17535 347 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 FEN1P39748 380 aaKnown RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 MAZP56270 477 aaKnown RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 RPL6Q02878 288 aaKnown RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 E2F2Q14209 437 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 ADRM1Q16186 407 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 DPY19L1Q2PZI1 675 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 GALNT18Q6P9A2 607 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 PTOV1Q86YD1 416 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.37■□□□□ 0.698e-8■■■■■ 49
PRKCD-202ENST00000394729 COL26A1Q96A83 441 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 KLHL3Q9UH77 587 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 SCOCQ9UIL1 159 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 GZMMP51124 257 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 SRSF5Q13243 272 aaKnown RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 SLAMF1Q13291 335 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 BLMHQ13867 455 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 FZD2Q14332 565 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 SPDYE7PQ495Y7 208 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 NDUFAF5Q5TEU4 345 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 WDR53Q7Z5U6 358 aaPredicted RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 OR4N5Q8IXE1 308 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 DEFB123Q8N688 67 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 GATA6Q92908 595 aa19.37■□□□□ 0.69
PRKCD-202ENST00000394729 APOBEC3BQ9UH17 382 aaKnown RBP19.37■□□□□ 0.69
PRKCD-202ENST00000394729 CLOCKO15516 846 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 CTSBP07858 339 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 MYF5P13349 255 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 PRIM2P49643 509 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 BTN3A2P78410 334 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 ID2Q02363 134 aa19.36■□□□□ 0.69
PRKCD-202ENST00000394729 ABHD18Q0P651 414 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms