RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CHCHD6Q9BRQ6 235 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CCM2Q9BSQ5 444 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 TAS2R16Q9NYV7 291 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 LSM7Q9UK45 103 aaKnown RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 SLC6A14Q9UN76 642 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CAB39Q9Y376 341 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 MGAT4DA6NG13 374 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 NRG2O14511 850 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 KPNA5O15131 536 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 TNFRSF21O75509 655 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CA3P07451 260 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 S100A5P33763 92 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 LRIT3Q3SXY7 679 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 MPPE1Q53F39 396 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CCDC92Q53HC0 331 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 ZNF648Q5T619 568 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 DEPDC1Q5TB30 811 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 ZDHHC20Q5W0Z9 365 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 DESI1Q6ICB0 168 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 DEPDC4Q8N2C3 294 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 METTL4Q8N3J2 472 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 OR9Q2Q8NGE9 314 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 SPPL3Q8TCT6 385 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 SCAMP4Q969E2 229 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CTRCQ99895 268 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 STOX2Q9P2F5 926 aaPredicted RBP17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 CCDC88CQ9P219 2028 aa17.6■□□□□ 0.41
PCDHA1-202ENST00000394633 J3KTA2 159 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 RNASET2O00584 256 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 HAT1O14929 419 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 SLCO2B1O94956 709 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 ADRA2AP08913 450 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 ALOX12P18054 663 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 UGT2B15P54855 530 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 CYP4F8P98187 520 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 SHHQ15465 462 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 CYP27C1Q4G0S4 372 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 HEATR4Q86WZ0 1026 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 CPXM2Q8N436 756 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 HUS1BQ8NHY5 278 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 ASZ1Q8WWH4 475 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 CFAP97Q9P2B7 532 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 DUSP12Q9UNI6 340 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 IFT52Q9Y366 437 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 OR2AG2A6NM03 316 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 PSIP1O75475 530 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 DNTTP04053 509 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 PTX3P26022 381 aaPredicted RBP17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 TIA1P31483 386 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 HBA1P69905 142 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 LILRA6Q6PI73 481 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 DPY19L3Q6ZPD9 716 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 OR7G3Q8NG95 312 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 NFKBIDQ8NI38 313 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 LMLNQ96KR4 655 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 MS4A12Q9NXJ0 267 aa17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 CFAP20Q9Y6A4 193 aaKnown RBP17.59■□□□□ 0.41
PCDHA1-202ENST00000394633 GNG14A0A1W2PPG7 69 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 GRM6O15303 877 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 HSMCR30P0CW71 290 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 ZNF8P17098 575 aaPredicted RBP17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 EPHB3P54753 998 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 RPS13P62277 151 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 SCARB2Q14108 478 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 EIF4HQ15056 248 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 SPIN4Q56A73 249 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 MPP7Q5T2T1 576 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 GCNT6Q5T4J0 391 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 CHST14Q8NCH0 376 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 CRELD1Q96HD1 420 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 SAMD11Q96NU1 681 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 CPEB1Q9BZB8 566 aaKnown RBP17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 SIAEQ9HAT2 523 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 THSD1Q9NS62 852 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 IMPAD1Q9NX62 359 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 MAPRE3Q9UPY8 281 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 PCDHGB6Q9Y5F9 930 aa17.58■□□□□ 0.4
PCDHA1-202ENST00000394633 PCDH17O14917 1159 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 CASP3P42574 277 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 BDKRB1P46663 353 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 HTR3DQ70Z44 454 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 KLHDC8AQ8IYD2 350 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 GPR65Q8IYL9 337 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 CYP4Z2PQ8N1L4 340 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 GOT1L1Q8NHS2 421 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 OR5M11Q96RB7 305 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 SLC35A5Q9BS91 424 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 HOXD1Q9GZZ0 328 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 MTIF3Q9H2K0 278 aaKnown RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ATP6V1HQ9UI12 483 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 ZNF232Q9UNY5 417 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 HS3ST2Q9Y278 367 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 KLK4Q9Y5K2 254 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 PEX16Q9Y5Y5 336 aa17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 MN1Q10571 1320 aaPredicted RBP17.57■□□□□ 0.4
PCDHA1-202ENST00000394633 PRUNE2Q8WUY3 3088 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms