RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LRRC58Q96CX6 371 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 SLC6A18Q96N87 628 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 NELL2Q99435 816 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 OR51B5Q9H339 312 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 SPAG4Q9NPE6 437 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 CD320Q9NPF0 282 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 OLAHQ9NV23 265 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 ATAD3AQ9NVI7 634 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
RTN4-205ENST00000394609 ZNF624Q9P2J8 865 aaPredicted RBP6.65□□□□□ -1.34
RTN4-205ENST00000394609 MUTYHQ9UIF7 546 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 ICKQ9UPZ9 632 aa6.65□□□□□ -1.34
RTN4-205ENST00000394609 A0A0C4DFX4 3053 aa6.65□□□□□ -1.35
RTN4-205ENST00000394609 SDK1Q7Z5N4 2213 aa6.65□□□□□ -1.35
RTN4-205ENST00000394609 MUC3AQ02505 3323 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 A0A1W2PPC4 97 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PRORSD1PA6NEY8 169 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TRIM38O00635 465 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 AKAP10O43572 662 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 NDUFS2O75306 463 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 GBAP04062 536 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 OCM2P0CE71 109 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 OCMP0CE72 109 aaPredicted RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 THEGLP0DJG4 465 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 JAK1P23458 1154 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SLC7A1P30825 629 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ENTPD1P49961 510 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 RAB28P51157 221 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 C21orf59P57076 290 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 RPS3AP61247 264 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 CYP4F2P78329 520 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 RHDQ02161 417 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ACSM2AQ08AH3 577 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 CSTF3Q12996 717 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 EIF2B5Q13144 721 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 C1orf61Q13536 156 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TUBA3CQ13748 450 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 E2F2Q14209 437 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 HIST2H2ACQ16777 129 aaPredicted RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 SMU1Q2TAY7 513 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SPANXN4Q5MJ08 99 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 INTS11Q5TA45 600 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 ACSM2BQ68CK6 577 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 HIST2H2AA3Q6FI13 130 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 KRT80Q6KB66 452 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PPP4R4Q6NUP7 873 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 C8orf82Q6P1X6 216 aaPredicted RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 LCTLQ6UWM7 567 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ABRAXAS1Q6UWZ7 409 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TMIGD1Q6UXZ0 262 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ADCK2Q7Z695 626 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 AMIGO2Q86SJ2 522 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 NRROSQ86YC3 692 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PLD3Q8IV08 490 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SLC15A3Q8IY34 581 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 LILRA2Q8N149 483 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 RAB42Q8N4Z0 105 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 C1orf52Q8N6N3 182 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 ANKFN1Q8N957 763 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PJA1Q8NG27 643 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 CDC26Q8NHZ8 85 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PATE1Q8WXA2 126 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ROPN1LQ96C74 230 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 WDR34Q96EX3 536 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PLEKHA8Q96JA3 519 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ZBTB18Q99592 522 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 NEURL2Q9BR09 285 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ORAI3Q9BRQ5 295 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 GPATCH1Q9BRR8 931 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 EFCAB11Q9BUY7 163 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PCDHAC1Q9H158 963 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 MIR1-1HGQ9H1L0 117 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 EHD1Q9H4M9 534 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 MVB12BQ9H7P6 319 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TMEM165Q9HC07 324 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 GID8Q9NWU2 228 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SPHK1Q9NYA1 384 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 LEF1Q9UJU2 399 aaPredicted RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 COLEC10Q9Y6Z7 277 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SPTY2D1-AS1A0A0U1RR47 76 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ZNF839A8K0R7 811 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 FXYD1O00168 92 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 EEDO75530 441 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 SULT1C4O75897 302 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 B3GALT4O96024 378 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TNFP01375 233 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ALBP02768 609 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 ALOX5P09917 674 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 CDH3P22223 829 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 MYF6P23409 242 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PRPH2P23942 346 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 SLC6A2P23975 617 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 PKLRP30613 574 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 CCR8P51685 355 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 TMBIM6P55061 237 aa6.64□□□□□ -1.35
RTN4-205ENST00000394609 MRPS22P82650 360 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 RPL6Q02878 288 aaKnown RBP6.64□□□□□ -1.35
RTN4-205ENST00000394609 ILF3Q12906 894 aaKnown RBP eCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms