RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 OR1L3Q8NH93 324 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 GFM2Q969S9 779 aaKnown RBP23.06■■□□□ 1.28
LRFN4-202ENST00000393952 TMEM74Q96NL1 305 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 COPS7BQ9H9Q2 264 aaPredicted RBP23.06■■□□□ 1.28
LRFN4-202ENST00000393952 FGF21Q9NSA1 209 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 TOR4AQ9NXH8 423 aa23.06■■□□□ 1.28
LRFN4-202ENST00000393952 LOC100653049A0A140TA62 436 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 H3BMH7 237 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 AKAP10O43572 662 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 OR2B3O76000 313 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 KRT34O76011 436 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 MED26O95402 600 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 MSL3P1P0C860 447 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 COX4I1P13073 169 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 TRA2AQ13595 282 aaKnown RBP eCLIP23.05■■□□□ 1.28
LRFN4-202ENST00000393952 TRIP6Q15654 476 aaKnown RBP23.05■■□□□ 1.28
LRFN4-202ENST00000393952 DEFB134Q4QY38 66 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 CCDC121Q6ZUS5 278 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 PRSS41Q7RTY9 318 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 C10orf90Q96M02 699 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 MYNNQ9NPC7 610 aa23.05■■□□□ 1.28
LRFN4-202ENST00000393952 FITM1A5D6W6 292 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 NR5A2O00482 541 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 SCELO95171 688 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 T-ENOLP0DO92 83 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 IL1RNP18510 177 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 TSFMP43897 325 aaKnown RBP23.04■■□□□ 1.28
LRFN4-202ENST00000393952 ASMTP46597 345 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 TAS2R50P59544 299 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 E2F1Q01094 437 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 C16orf72Q14CZ0 275 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 HERC3Q15034 1050 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 RBM44Q6ZP01 1051 aaKnown RBP23.04■■□□□ 1.28
LRFN4-202ENST00000393952 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.04■■□□□ 1.28
LRFN4-202ENST00000393952 ZNF501Q96CX3 271 aaPredicted RBP23.04■■□□□ 1.28
LRFN4-202ENST00000393952 NSL1Q96IY1 281 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 ZBTB18Q99592 522 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 TAGLN3Q9UI15 199 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 SLC22A7Q9Y694 548 aa23.04■■□□□ 1.28
LRFN4-202ENST00000393952 HYKKA2RU49 373 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 FAM234BA2RU67 622 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 PRDX6P30041 224 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 POLR2JP52435 117 aaKnown RBP23.03■■□□□ 1.28
LRFN4-202ENST00000393952 LIMK1P53667 647 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 INSM1Q01101 510 aaPredicted RBP23.03■■□□□ 1.28
LRFN4-202ENST00000393952 BNIP1Q12981 228 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 SLAMF1Q13291 335 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 SPRED3Q2MJR0 410 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 PDSS2Q86YH6 399 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 RIMKLAQ8IXN7 391 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 ZCCHC7Q8N3Z6 543 aaKnown RBP23.03■■□□□ 1.28
LRFN4-202ENST00000393952 DTWD1Q8N5C7 304 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 TM4SF18Q96CE8 201 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 ROGDIQ9GZN7 287 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 FANCEQ9HB96 536 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 SIDT1Q9NXL6 827 aaKnown RBP23.03■■□□□ 1.28
LRFN4-202ENST00000393952 RAPGEFL1Q9UHV5 662 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 FAM186AA6NE01 2351 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 GVINP1Q7Z2Y8 2422 aa23.03■■□□□ 1.28
LRFN4-202ENST00000393952 ZNF860A6NHJ4 632 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 HYAL3O43820 417 aaPredicted RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 SNRPB2P08579 225 aaKnown RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 IL3P08700 152 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 FAM58BPP0C7Q3 252 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 PCSK2P16519 638 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 PRPS1L1P21108 318 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 CPA2P48052 419 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 MTTPP55157 894 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 ITGA1P56199 1179 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 ACY1Q03154 408 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 CYLC2Q14093 348 aaPredicted RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 GRM7Q14831 915 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 MRM1Q6IN84 353 aaKnown RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 FAM71E1Q6IPT2 247 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 BLOC1S3Q6QNY0 202 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 GLRX5Q86SX6 157 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 TMEM132CQ8N3T6 1108 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 TTC29Q8NA56 475 aaPredicted RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 CMTM5Q96DZ9 223 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 SERINC2Q96SA4 455 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 CLMPQ9H6B4 373 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 ENAMQ9NRM1 1142 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 TMEM45AQ9NWC5 275 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 EXO1Q9UQ84 846 aaKnown RBP23.02■■□□□ 1.28
LRFN4-202ENST00000393952 NAALAD2Q9Y3Q0 740 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 PCDHGA1Q9Y5H4 931 aa23.02■■□□□ 1.28
LRFN4-202ENST00000393952 GALR3O60755 368 aaPredicted RBP23.01■■□□□ 1.27
LRFN4-202ENST00000393952 CSTF2P33240 577 aaKnown RBP eCLIP23.01■■□□□ 1.27
LRFN4-202ENST00000393952 CLNS1AP54105 237 aaKnown RBP23.01■■□□□ 1.27
LRFN4-202ENST00000393952 HNRNPH2P55795 449 aaKnown RBP23.01■■□□□ 1.27
LRFN4-202ENST00000393952 CLDN6P56747 220 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 MC1RQ01726 317 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 C2orf80Q0P641 193 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 RCAN2Q14206 197 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 SLC9A5Q14940 896 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 MAPRE2Q15555 327 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 NDUFA9Q16795 377 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 GARNL3Q5VVW2 1013 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 GPR135Q8IZ08 494 aa23.01■■□□□ 1.27
LRFN4-202ENST00000393952 MMP21Q8N119 569 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms