RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PCDH17O14917 1159 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 GBAP04062 536 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PRIM2P49643 509 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 MC1RQ01726 317 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 OXR1Q8N573 874 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PARP16Q8N5Y8 322 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 B3GNT7Q8NFL0 401 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 GEMIN6Q8WXD5 167 aaKnown RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 MYLIPQ8WY64 445 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 PIP5K1AQ99755 562 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 ZNF556Q9HAH1 456 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 IFT52Q9Y366 437 aa18.06■□□□□ 0.48
CBX1-202ENST00000393408 CFAP20Q9Y6A4 193 aaKnown RBP18.06■□□□□ 0.48
CBX1-202ENST00000393408 GPR37L1O60883 481 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 SRPRAP08240 638 aaKnown RBP18.05■□□□□ 0.48
CBX1-202ENST00000393408 TIMP2P16035 220 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 PDHA2P29803 388 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 TPTEP56180 551 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 OLR1P78380 273 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 CDK6Q00534 326 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 CRB2Q5IJ48 1285 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 TXNDC15Q96J42 360 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 FAM129BQ96TA1 746 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 CHCHD6Q9BRQ6 235 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 QPCTLQ9NXS2 382 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 SPG21Q9NZD8 308 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 SH2B3Q9UQQ2 575 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 CCL26Q9Y258 94 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 KLK4Q9Y5K2 254 aa18.05■□□□□ 0.48
CBX1-202ENST00000393408 PRAMEF33A0A0G2JMD5 474 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 PRAMEF10O60809 474 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 LEFTY1O75610 366 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 KCNK2O95069 426 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 CBLP22681 906 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 S100A5P33763 92 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 RECQLP46063 649 aaPredicted RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 HMGA2P52926 109 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 UGT2B15P54855 530 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 CYP4F2P78329 520 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 ZNF284Q2VY69 593 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 TRIM40Q6P9F5 258 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 ZNF367Q7RTV3 350 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 TMCO2Q7Z6W1 182 aaPredicted RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 RNF130Q86XS8 419 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
CBX1-202ENST00000393408 ZNF480Q8WV37 535 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 GLYATL1Q969I3 302 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 PPCDCQ96CD2 204 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 WDR34Q96EX3 536 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 VPS35Q96QK1 796 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 TAS2R16Q9NYV7 291 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 HCN4Q9Y3Q4 1203 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 NEDD8-MDP1E9PL57 170 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 FOXE1O00358 373 aaPredicted RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 PLK4O00444 970 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 KLHL18O94889 574 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 PTTG1O95997 202 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 POU2F1P14859 743 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 GTF2E2P29084 291 aaKnown RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 HOXD12P35452 270 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 MAPK9P45984 424 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 PCBP3P57721 371 aaKnown RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 TBPL1P62380 186 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 KCNJ8Q15842 424 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 SLC5A12Q1EHB4 618 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 ZNF630Q2M218 657 aaPredicted RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 ADIPOR2Q86V24 386 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 SCAIQ8N9R8 606 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 WDR48Q8TAF3 677 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 C9orf43Q8TAL5 461 aaPredicted RBP18.04■□□□□ 0.48
CBX1-202ENST00000393408 C16orf78Q8WTQ4 265 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 Q96MT0 163 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 FOPNLQ96NB1 174 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 CDCA4Q9BXL8 241 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 TRIM39Q9HCM9 518 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 DMRT3Q9NQL9 472 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 MAP4K5Q9Y4K4 846 aa18.04■□□□□ 0.48
CBX1-202ENST00000393408 ADRA2AP08913 450 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 SPNP16150 400 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 C2orf80Q0P641 193 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 SLBPQ14493 270 aaKnown RBP eCLIP18.03■□□□□ 0.48
CBX1-202ENST00000393408 PTGES3Q15185 160 aaKnown RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 PRSS53Q2L4Q9 553 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 ARSIQ5FYB1 569 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TOR1AIP1Q5JTV8 583 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TECPR1Q7Z6L1 1165 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 LAS2Q8IYD9 372 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 OR5AK3PQ8NH89 298 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 GTPBP3Q969Y2 492 aaKnown RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 TMEM121BQ9BXQ6 578 aaPredicted RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 FTSJ1Q9UET6 329 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 ENPP4Q9Y6X5 453 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TSPAN11A1L157 253 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 SAP18O00422 153 aaKnown RBP18.03■□□□□ 0.48
CBX1-202ENST00000393408 ZNF197O14709 1029 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 HAT1O14929 419 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 TGM5O43548 720 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 CCNB2O95067 398 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 C1orf105O95561 183 aa18.03■□□□□ 0.48
CBX1-202ENST00000393408 DLGAP3O95886 979 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms