RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TSNAXIP1Q2TAA8 658 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 PAGE2BQ5JRK9 111 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 LGSNQ5TDP6 509 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 VWA5B1Q5TIE3 1220 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 B3GNTL1Q67FW5 361 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 FCRLBQ6BAA4 426 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HIST2H2AA3Q6FI13 130 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 GRHL2Q6ISB3 625 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MED27Q6P2C8 311 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ABHD17CQ6PCB6 329 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF793Q6ZN11 406 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 LINC00696Q6ZRV3 163 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 NDUFAF7Q7L592 441 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 UBE3DQ7Z6J8 389 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 CLNKQ7Z7G1 428 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 LAS2Q8IYD9 372 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 SIRT6Q8N6T7 355 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 RBMXL3Q8N7X1 1067 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 EIF1ADQ8N9N8 165 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TTLQ8NG68 377 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR2L5Q8NG80 312 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR7G3Q8NG95 312 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HUS1BQ8NHY5 278 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 BRIX1Q8TDN6 353 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 AENQ8WTP8 325 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF473Q8WTR7 871 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 METTL21AQ8WXB1 218 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 GAL3ST3Q96A11 431 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TBC1D20Q96BZ9 403 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MTFMTQ96DP5 389 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MTBPQ96DY7 904 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAR2Q96K12 515 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 QRFPRQ96P65 431 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM237Q96Q45 408 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MTERF1Q99551 399 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 SMAD5Q99717 465 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 WDR77Q9BQA1 342 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MRPL57Q9BQC6 102 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF700Q9H0M5 742 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZBTB26Q9HCK0 441 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 DMRT3Q9NQL9 472 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 NECTIN3Q9NQS3 549 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 PTGFRNQ9P2B2 879 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 PCTPQ9UKL6 214 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 EMCNQ9ULC0 261 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 TNRC6AQ8NDV7 1962 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 RELNP78509 3460 aa7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
HMGB3P1-201ENST00000393368 HEATR5BQ9P2D3 2071 aa7.21□□□□□ -1.25
HMGB3P1-201ENST00000393368 TLN1Q9Y490 2541 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 LOC102723996A0A087X1L8 192 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ARHGAP10A1A4S6 786 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCDC189A1A4V9 331 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 URADA6NGE7 173 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 MAGEB17A8MXT2 336 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 STX16-NPEPL1H3BU86 382 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TGFBR3LH3BV60 316 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PSMD12O00232 456 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 STX16O14662 325 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 B3GALT2O43825 422 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 DLX3O60479 287 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRKRAO75569 313 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ETHE1O95571 254 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 RPS17P08708 135 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRR35P0CG20 571 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 KRT15P19012 456 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PPP2R1BP30154 601 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 CASP2P42575 452 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 LIM2P55344 173 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 SOX8P57073 446 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRAF3Q13114 568 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 E2F2Q14209 437 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZRSR2Q15696 482 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 NSDHLQ15738 373 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ADPRMQ3LIE5 342 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 SFT2D3Q587I9 215 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 SGO1Q5FBB7 561 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TCHHL1Q5QJ38 904 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC6A19Q695T7 634 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 JMJD6Q6NYC1 403 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRIM40Q6P9F5 258 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ATG14Q6ZNE5 492 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 CPEB2Q7Z5Q1 589 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 KBTBD2Q8IY47 623 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 C4orf33Q8N1A6 199 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 Q8NA96 180 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TRPC4APQ8TEL6 797 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF483Q8TF39 744 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 SREK1Q8WXA9 508 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PSMF1Q92530 271 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ATP6V1E2Q96A05 226 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 NACC2Q96BF6 587 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PTCHD1Q96NR3 888 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR1F2PQ96R84 312 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 HBEGFQ99075 208 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 MAPKAP1Q9BPZ7 522 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCDC77Q9BR77 488 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms