RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PBKQ96KB5 322 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 MYADMQ96S97 322 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 RBBP8Q99708 897 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 G6PC3Q9BUM1 346 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZMYND12Q9H0C1 365 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GEMIN7Q9H840 131 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CDH20Q9HBT6 801 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PCDH9Q9HC56 1237 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GKN1Q9NS71 199 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 CLDN16Q9Y5I7 305 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 MAST3O60307 1309 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 A0A0U1RQV5 110 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PRSS51A0A1B0GVH4 220 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PEX10O60683 326 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 DGAT1O75907 488 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 UFL1O94874 794 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 H6PDO95479 791 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 HOXB8P17481 243 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 PRKACAP17612 351 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SHMT1P34896 483 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 OR1D2P34982 312 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PPP1R2P41236 205 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 RGS19P49795 217 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DMC1Q14565 340 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 TAF13Q15543 124 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SYTL3Q4VX76 610 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DCAF6Q58WW2 860 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GPR157Q5UAW9 335 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 LYSMD4Q5XG99 296 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PPP1R2P3Q6NXS1 205 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PQLC2Q6ZP29 291 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 Q7L0L9 218 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 BZW1Q7L1Q6 419 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 GPR65Q8IYL9 337 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GPR137CQ8N3F9 429 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 OR1L4Q8NGR5 311 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 OR52I2Q8NH67 350 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SSMEM1Q8WWF3 244 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 IFT81Q8WYA0 676 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SDSLQ96GA7 329 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 RAB40CQ96S21 281 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DCUN1D5Q9BTE7 237 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 NUSAP1Q9BXS6 441 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 GPR87Q9BY21 358 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 VCXQ9H320 206 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZNF552Q9H707 407 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 PPP1R3EQ9H7J1 279 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 FBXL2Q9UKC9 423 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SLC30A1Q9Y6M5 507 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DUSP10Q9Y6W6 482 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DEPDC5O75140 1603 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 NPC1L1Q9UHC9 1359 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GAKO14976 1311 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 CYP3A7-CYP3A51PA0A087WV96 503 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GSTTP1A0A1W2PQM5 241 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 NEMP2A6NFY4 417 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ASB14A6NK59 587 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GOLGA8JA6NMD2 632 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 TRAFD1O14545 582 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 ITM2AO43736 263 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SNX3O60493 162 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PFDN1O60925 122 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SYF2O95926 243 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 MT-ND1P03886 318 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 CYP3A7P24462 503 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DUSP1P28562 367 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GMPSP49915 693 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 YBX1P67809 324 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 HSDL1Q3SXM5 330 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 Q4G0T1 1027 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 AGKQ53H12 422 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZNF618Q5T7W0 954 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZNF841Q6ZN19 808 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 CYP4Z1Q86W10 505 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PAQR7Q86WK9 346 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SLC5A8Q8N695 610 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 STEAP2Q8NFT2 490 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 OR4K1Q8NGD4 311 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DACT3Q96B18 629 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PCDHB18PQ96TA0 734 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 CCDC28BQ9BUN5 200 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SGPP1Q9BX95 441 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 TRIM4Q9C037 500 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 MIS12Q9H081 205 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SLC6A17Q9H1V8 727 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 KAT8Q9H7Z6 458 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 DDX4Q9NQI0 724 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 POT1Q9NUX5 634 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 MIS18AQ9NYP9 233 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 WASF3Q9UPY6 502 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 KPTNQ9Y664 436 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 FANCD2Q9BXW9 1451 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SULT1B1O43704 296 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 PEX1O43933 1283 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 KNG1P01042 644 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SAGP10523 405 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CD8BP10966 210 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms