RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 IL18R1Q13478 541 aa24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 MLF2Q15773 248 aaPredicted RBP24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 SLC5A12Q1EHB4 618 aa24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 ADGRF3Q8IZF5 1079 aa24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 MRPL38Q96DV4 380 aaKnown RBP24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 NRBF2Q96F24 287 aa24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 MKRN2Q9H000 416 aaKnown RBP24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 FBXL12Q9NXK8 326 aa24.46■■□□□ 1.51
SMARCD3-203ENST00000392811 ZNF701M0R085 212 aaPredicted RBP24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 AGXTP21549 392 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 BSGP35613 385 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 CHI3L1P36222 383 aaPredicted RBP24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 MAGEA10P43363 369 aaPredicted RBP24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 IL1RL1Q01638 556 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 SGCGQ13326 291 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 TMEM259Q4ZIN3 620 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 RNF130Q86XS8 419 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 RIBC2Q9H4K1 309 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 C1GALT1Q9NS00 363 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 KCNK6Q9Y257 313 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 MAP4K5Q9Y4K4 846 aa24.45■■□□□ 1.51
SMARCD3-203ENST00000392811 ATG2BQ96BY7 2078 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 A0A1W2PQU0 124 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 ABCB7O75027 752 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 OPN1SWP03999 348 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 RYKP34925 604 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 SOAT1P35610 550 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 TNFRSF4P43489 277 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 SELENOWP63302 87 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 FADDQ13158 208 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 RAPSNQ13702 412 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 SCARB2Q14108 478 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 SKIV2LQ15477 1246 aaKnown RBP24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 FAM180BQ6P0A1 224 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 OR14C36Q8NHC7 312 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 NFKBIDQ8NI38 313 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 C12orf43Q96C57 262 aaKnown RBP24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 SLC6A17Q9H1V8 727 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 THUMPD1Q9NXG2 353 aaKnown RBP24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 PLEKHM1Q9Y4G2 1056 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 PLXND1Q9Y4D7 1925 aa24.45■■□□□ 1.5
SMARCD3-203ENST00000392811 PRIM2P49643 509 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 MAPK12P53778 367 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 RBBP4Q09028 425 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 GPR107Q5VW38 600 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TRIM40Q6P9F5 258 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TUBA1CQ9BQE3 449 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TMEM38AQ9H6F2 299 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 FANCEQ9HB96 536 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 PADI2Q9Y2J8 665 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 DPM1O60762 260 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 UGT2B11O75310 529 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 CEACAM5P06731 702 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 CYP4B1P13584 511 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 JUNBP17275 347 aaPredicted RBP24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 SIM2Q14190 667 aaPredicted RBP24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TSEN54Q7Z6J9 526 aaKnown RBP24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TM4SF18Q96CE8 201 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 CAMK1GQ96NX5 476 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 TIMM29Q9BSF4 260 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 SLC17A9Q9BYT1 436 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 XKR8Q9H6D3 395 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 NT5DC2Q9H857 520 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 IMP3Q9NV31 184 aaKnown RBP24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 ICKQ9UPZ9 632 aa24.44■■□□□ 1.5
SMARCD3-203ENST00000392811 DDCP20711 480 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 DCKP27707 260 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 SERPINB1P30740 379 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 GABARAPL2P60520 117 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 EEF1A2Q05639 463 aaKnown RBP24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 TOP3AQ13472 1001 aaPredicted RBP24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 XAF1Q6GPH4 301 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 RAB42Q8N4Z0 105 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 SPPL2AQ8TCT8 520 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 FBLIM1Q8WUP2 373 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 SH3GL3Q99963 347 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 BTBD1Q9H0C5 482 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 LHX9Q9NQ69 397 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 BLOC1S6Q9UL45 172 aa24.43■■□□□ 1.5
SMARCD3-203ENST00000392811 CAPN5O15484 640 aaPredicted RBP24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 PLRG1O43660 514 aaKnown RBP24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 OR1F1O43749 312 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 JRKO75564 520 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 C9P02748 559 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 HTR1AP08908 422 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 IGFALSP35858 605 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 CLK3P49761 638 aaKnown RBP24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 IL5RAQ01344 420 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 PAGE2Q7Z2X7 111 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 ZNF420Q8TAQ5 688 aaPredicted RBP24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 TAMM41Q96BW9 452 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 EPYCQ99645 322 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 MYOCQ99972 504 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 ABCG4Q9H172 646 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 CXorf36Q9H7Y0 433 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 KIF17Q9P2E2 1029 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 SLC17A4Q9Y2C5 497 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 DGKBQ9Y6T7 804 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 SLC1A7O00341 560 aa24.42■■□□□ 1.5
SMARCD3-203ENST00000392811 RNGTTO60942 597 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms