RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 UGDHO60701 494 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 B4GALT2O60909 372 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 SEC24DO94855 1032 aaPredicted RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 MYBL2P10244 700 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 TNFRSF8P28908 595 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 CD97P48960 835 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 PLA2G16P53816 162 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 MLLT10P55197 1068 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 KCNC4Q03721 635 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 TGM3Q08188 693 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 MFAP5Q13361 173 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 GTF2H2Q13888 395 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 CRB2Q5IJ48 1285 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 LIPJQ5W064 366 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 ADNP2Q6IQ32 1131 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 GRHL2Q6ISB3 625 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 GTF2H2CQ6P1K8 395 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 TRIM40Q6P9F5 258 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 ABHD17CQ6PCB6 329 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 QSOX2Q6ZRP7 698 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 GSPT2Q8IYD1 628 aaKnown RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 Q8NA96 180 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 SRFBP1Q8NEF9 429 aaKnown RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 ZNF473Q8WTR7 871 aaKnown RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 PSMF1Q92530 271 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 SCYL1Q96KG9 808 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 QRFPRQ96P65 431 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 WDR77Q9BQA1 342 aaPredicted RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 MRPL57Q9BQC6 102 aaKnown RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 CCDC77Q9BR77 488 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 MS4A8Q9BY19 250 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 MRPL46Q9H2W6 279 aaKnown RBP11.14□□□□□ -0.63
RFC4-202ENST00000392481 EPS8L2Q9H6S3 715 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 SLAMF7Q9NQ25 335 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 XPR1Q9UBH6 696 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 ADGRE2Q9UHX3 823 aa11.14□□□□□ -0.63
RFC4-202ENST00000392481 PTPN13Q12923 2485 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 IGHV3-20A0A0C4DH32 117 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 A0A0G2JN53 185 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 IQANK1A0A1B0GTG1 560 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 LRRC14BA6NHZ5 514 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 STX16-NPEPL1H3BU86 382 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 E2F3O00716 465 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 STX16O14662 325 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 B3GALT2O43825 422 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SMIM24O75264 130 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SIX3O95343 332 aaPredicted RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 SOX11P35716 441 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 ACTN3Q08043 901 aaPredicted RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 IGFBP7Q16270 282 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 EXT1Q16394 746 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PLEKHN1Q494U1 663 aaPredicted RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 TMEM35AQ53FP2 167 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 Q6ZS92 163 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 GOLGA7Q7Z5G4 137 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 LCA5Q86VQ0 697 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 CA13Q8N1Q1 262 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PTGR2Q8N8N7 351 aaPredicted RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 BRIX1Q8TDN6 353 aaKnown RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 ADAMTS18Q8TE60 1221 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PPP4R1Q8TF05 950 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 TSLPQ969D9 159 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 MIB2Q96AX9 1013 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PTCHD1Q96NR3 888 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 F2RL3Q96RI0 385 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SERINC2Q96SA4 455 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 LPAR4Q99677 370 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 ROGDIQ9GZN7 287 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 CLMPQ9H6B4 373 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 IPPKQ9H8X2 491 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 ACTR8Q9H981 624 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PSMC3IPQ9P2W1 217 aaPredicted RBP11.13□□□□□ -0.63
RFC4-202ENST00000392481 PLAAQ9Y263 795 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 PCDHGA11Q9Y5H2 935 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SHANK1Q9Y566 2161 aa11.13□□□□□ -0.63
RFC4-202ENST00000392481 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 FAM227AF5H4B4 570 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 CELA2AP08217 269 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 ITGAMP11215 1152 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 PCNAP12004 261 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 EEF1DP29692 281 aaKnown RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 PIK3CBP42338 1070 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 MTTPP55157 894 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 OR4D2P58180 307 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 BTG2P78543 158 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 RUNX2Q13950 521 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 RCN2Q14257 317 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 LINC00696Q6ZRV3 163 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 CHSY3Q70JA7 882 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 MYLK4Q86YV6 388 aaPredicted RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 SIRT6Q8N6T7 355 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms