RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 TRIM40Q6P9F5 258 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 MYLK4Q86YV6 388 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 RNF175Q8N4F7 328 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 HUS1BQ8NHY5 278 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF483Q8TF39 744 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 METTL21AQ8WXB1 218 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 FAR2Q96K12 515 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 CDK15Q96Q40 435 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 NTMT1Q9BV86 223 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 NPLQ9BXD5 320 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF700Q9H0M5 742 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 PRDM7Q9NQW5 492 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 DCDC2Q9UHG0 476 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 EMCNQ9ULC0 261 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 G3BP2Q9UN86 482 aaKnown RBP20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF451Q9Y4E5 1061 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 PCDHGA11Q9Y5H2 935 aa20.75■□□□□ 0.91
IGHV3-20-201ENST00000390606 NSG1A0A0A6YYJ2 146 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 CLDN9O95484 217 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 TGFB1P01137 390 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 RNH1P13489 461 aaKnown RBP20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 KRT15P19012 456 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 ITGA3P26006 1051 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 PIK3CBP42338 1070 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 CPSF6Q16630 551 aaKnown RBP eCLIP20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 RPS27LQ71UM5 84 aaKnown RBP20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 ANKRD37Q7Z713 158 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 AMER2Q8N7J2 671 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 WDR20Q8TBZ3 569 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 TSLPQ969D9 159 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 IMMP1LQ96LU5 166 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 DMRT3Q9NQL9 472 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 RIC8BQ9NVN3 520 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 ADGRE2Q9UHX3 823 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 RAB21Q9UL25 225 aa20.74■□□□□ 0.91
IGHV3-20-201ENST00000390606 IGHV3-20A0A0C4DH32 117 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 MAGEB17A8MXT2 336 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 FAM227AF5H4B4 570 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 PPP6CO00743 305 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 B3GALT2O43825 422 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 B4GALT2O60909 372 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 GLRA3O75311 464 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 TAC1P20366 129 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 JAK1P23458 1154 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ATP5F1P24539 256 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 CERS1P27544 350 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 CCNG1P51959 295 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 MTTPP55157 894 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 CDH13P55290 713 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 HERVK_113P63132 956 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 KLRB1Q12918 225 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZRSR2Q15696 482 aaKnown RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 TMEM35AQ53FP2 167 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 UNC50Q53HI1 259 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 DEPDC1Q5TB30 811 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF793Q6ZN11 406 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 CPEB2Q7Z5Q1 589 aaKnown RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF605Q86T29 641 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ATP6V1E2Q96A05 226 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 CMTM7Q96FZ5 175 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 SERINC2Q96SA4 455 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 WDR77Q9BQA1 342 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ERVK-6Q9BXR3 956 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 OR51B5Q9H339 312 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 SEMA4BQ9NPR2 832 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 C5AR2Q9P296 337 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ANAPC2Q9UJX6 822 aa20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 HEMK1Q9Y5R4 338 aaPredicted RBP20.73■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF462Q96JM2 2506 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 A0A088AWK7 358 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 A0A1B0GTL3 188 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 SH3BGRLO75368 114 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 ZNF10P21506 573 aaPredicted RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 TGM3Q08188 693 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 DDX39BQ13838 428 aaKnown RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 ABRAXAS2Q15018 415 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 KHDRBS2Q5VWX1 349 aaKnown RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 QSOX2Q6ZRP7 698 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 MREGQ8N565 214 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 SRFBP1Q8NEF9 429 aaKnown RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 REPS1Q96D71 796 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 THOC3Q96J01 351 aaKnown RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 KCNC2Q96PR1 638 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 TMEM237Q96Q45 408 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 MTERF1Q99551 399 aaKnown RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 TUBB6Q9BUF5 446 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 LHPPQ9H008 270 aa20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 C19orf25Q9UFG5 118 aaPredicted RBP20.72■□□□□ 0.91
IGHV3-20-201ENST00000390606 SCN2AQ99250 2005 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 IGKV3D-11A0A0A0MRZ8 115 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 TLDC2A0PJX2 215 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 PSMD12O00232 456 aaPredicted RBP20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 RTCAO00442 366 aaKnown RBP20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 KLHL41O60662 606 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 SCELO95171 688 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 SERPINA7P05543 415 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 CELA2AP08217 269 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 PRR35P0CG20 571 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 CRHR1P34998 444 aa20.71■□□□□ 0.91
IGHV3-20-201ENST00000390606 PRKAA2P54646 552 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms