RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PGAM5Q96HS1 289 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 PYURFQ96I23 114 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 OR1F2PQ96R84 312 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 MAPKAP1Q9BPZ7 522 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 NUSAP1Q9BXS6 441 aaKnown RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 NLGN3Q9NZ94 848 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 RNF6Q9Y252 685 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 SLC22A14Q9Y267 594 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 PRDM15P57071 1507 aaPredicted RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 CREBL2O60519 120 aaPredicted RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 ALPIP09923 528 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 JMJD7P0C870 316 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 ELNP15502 786 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 PBX3P40426 434 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 CDK6Q00534 326 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 GALK2Q01415 458 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 EIF2B1Q14232 305 aaKnown RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 GAS6Q14393 721 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 PON2Q15165 354 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 DPY19L1Q2PZI1 675 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 FUT10Q6P4F1 479 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 GPR149Q86SP6 731 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 WDSUB1Q8N9V3 476 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 SCRN2Q96FV2 425 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 TP63Q9H3D4 680 aaPredicted RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 ZNF395Q9H8N7 513 aaPredicted RBP5.68□□□□□ -1.5
RFX3-204ENST00000382004 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 DERAQ9Y315 318 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 PCDHGA2Q9Y5H1 932 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 ST14Q9Y5Y6 855 aa5.68□□□□□ -1.5
RFX3-204ENST00000382004 JCADQ9P266 1359 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF705GA8MUZ8 300 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLITRK5O94991 958 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 IL3P08700 152 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GRPRP30550 384 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 NDST2P52849 883 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CASP6P55212 293 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 NFE2L1Q14494 772 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 VSIG10LQ86VR7 867 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF808Q8N4W9 903 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 BBS1Q8NFJ9 593 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CANT1Q8WVQ1 401 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GCDHQ92947 438 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 PLD4Q96BZ4 506 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MAELQ96JY0 434 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 ZNF641Q96N77 438 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 FAM83CQ9BQN1 747 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 FUCA2Q9BTY2 467 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 C19orf25Q9UFG5 118 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 C2orf72A6NCS6 295 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 INMT-MINDY4F8WBC2 141 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GMDSO60547 372 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 NUDT7P0C024 238 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 H2AFB2P0C5Z0 115 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PIK3CBP42338 1070 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RIDAP52758 137 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 CTBP2P56545 445 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CDK3Q00526 305 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MEP1AQ16819 746 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ITPRIPL2Q3MIP1 535 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 MPP7Q5T2T1 576 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 LRFN4Q6PJG9 635 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 OR51G2Q8NGK0 314 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CHPT1Q8WUD6 406 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RRNAD1Q96FB5 475 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 SAMD11Q96NU1 681 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PHOX2BQ99453 314 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RNF215Q9Y6U7 377 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CDC42BPBQ9Y5S2 1711 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 TCRBV7S2A1N4TA0A589 114 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 GLOD5A6NK44 160 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 HAS3O00219 553 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLC19A2O60779 497 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLC34A2O95436 690 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CKMT1AP12532 417 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 FRKP42685 505 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 CDKN2BP42772 138 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 NR4A2P43354 598 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 HERVK_113P63132 956 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RSU1Q15404 277 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 INTS5Q6P9B9 1019 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 DPY19L3Q6ZPD9 716 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SAMD9LQ8IVG5 1584 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 DNAJB8Q8NHS0 232 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 BSCL2Q96G97 398 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 ERVK-6Q9BXR3 956 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 DPEP3Q9H4B8 488 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 AKTIPQ9H8T0 292 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 SLC38A8A6NNN8 435 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 IRF6O14896 467 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 ANKRD28O15084 1053 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 CHRM1P11229 460 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 HNF1BP35680 557 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 DPP6P42658 865 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 POU3F4P49335 361 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 PRKXP51817 358 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 RRAS2P62070 204 aaPredicted RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 IL10RBQ08334 325 aa5.67□□□□□ -1.5
RFX3-204ENST00000382004 LASP1Q14847 261 aaKnown RBP5.67□□□□□ -1.5
RFX3-204ENST00000382004 SWT1Q5T5J6 900 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms