RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 WHRNQ9P202 907 aa12.18□□□□□ -0.46
RPAIN-202ENST00000381208 LRFN1Q9P244 771 aa12.18□□□□□ -0.46
RPAIN-202ENST00000381208 PSAT1Q9Y617 370 aa12.18□□□□□ -0.46
RPAIN-202ENST00000381208 IGKV3D-11A0A0A0MRZ8 115 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SLC19A2O60779 497 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 CLEC3AO75596 197 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SP1P08047 785 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 GSTA2P09210 222 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 TRHRP34981 398 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-202ENST00000381208 CLCN2P51788 898 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 RAB8AP61006 207 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 OLR1P78380 273 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 TGM3Q08188 693 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 TGFBIQ15582 683 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 TSNQ15631 228 aaKnown RBP12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SP5Q6BEB4 398 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 XKRXQ6PP77 449 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SLCO4C1Q6ZQN7 724 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 POGLUT1Q8NBL1 392 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 SIGLEC12Q96PQ1 595 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 KRT12Q99456 494 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 DEFB126Q9BYW3 111 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 PHACTR1Q9C0D0 580 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 IKZF3Q9UKT9 509 aa12.17□□□□□ -0.46
RPAIN-202ENST00000381208 ANKDD1BA6NHY2 528 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 CLGNO14967 610 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 TP73O15350 636 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GPR37O15354 613 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 B3GALT2O43825 422 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF500O60304 480 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SLC25A12O75746 678 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 NEURL1O76050 574 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ESRRAP11474 423 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 STMN1P16949 149 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GGT5P36269 586 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GP5P40197 560 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 HNF4AP41235 474 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 HLCSP50747 726 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SMSP52788 366 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 PGGT1BP53609 377 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 HSD17B7P56937 341 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 MLF1P58340 268 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 BTN3A2P78410 334 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 HYAL2Q12891 473 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 LAPTM5Q13571 262 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SLBPQ14493 270 aaKnown RBP eCLIP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 FASTKD3Q14CZ7 662 aaKnown RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 TOR1AIP1Q5JTV8 583 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SULT1C3Q6IMI6 304 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 TRIM40Q6P9F5 258 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 Q6ZPB1 254 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GALNTL5Q7Z4T8 443 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 MRGPRGQ86SM5 289 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GPSM1Q86YR5 675 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF595Q8IYB9 648 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 CA13Q8N1Q1 262 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 GHDCQ8N2G8 530 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SRFBP1Q8NEF9 429 aaKnown RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 B3GNT7Q8NFL0 401 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ANKRD49Q8WVL7 239 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ITLN2Q8WWU7 325 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 CCDC120Q96HB5 630 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 FRMD6Q96NE9 622 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 NPAS2Q99743 824 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ERP44Q9BS26 406 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 EFCAB11Q9BUY7 163 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 ROGDIQ9GZN7 287 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 RRAGDQ9NQL2 400 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-202ENST00000381208 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 DNAJC11Q9NVH1 559 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 WWOXQ9NZC7 414 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 SNX24Q9Y343 169 aa12.16□□□□□ -0.46
RPAIN-202ENST00000381208 PCNX1Q96RV3 2341 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 LRIT2A6NDA9 550 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 USP27XA6NNY8 438 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 FAM227AF5H4B4 570 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 ERI3O43414 337 aaKnown RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 NME2P1O60361 137 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 STK16O75716 305 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 NME2P22392 152 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 RAB38P57729 211 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 BTG2P78543 158 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 PMP22Q01453 160 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 CAV1Q03135 178 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 SRSF11Q05519 484 aaKnown RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF460Q14592 562 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 MAPKAPK3Q16644 382 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 HIST2H2ACQ16777 129 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-202ENST00000381208 ADPRMQ3LIE5 342 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 HIST2H2AA3Q6FI13 130 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 SPPL2CQ8IUH8 684 aa12.15□□□□□ -0.46
RPAIN-202ENST00000381208 CEP97Q8IW35 865 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms