RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RYKP34925 604 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 HSPA7P48741 367 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 FNTBP49356 437 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 WNT3P56703 355 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 NXPH1P58417 271 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 RPL6Q02878 288 aaKnown RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 E2F2Q14209 437 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 ZNF829Q3KNS6 432 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PLK5Q496M5 336 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 GTDC1Q4AE62 458 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 METRNLQ641Q3 311 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 CAPN13Q6MZZ7 669 aaPredicted RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 UNC5DQ6UXZ4 953 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 FAM124AQ86V42 546 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 ASZ1Q8WWH4 475 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 HBEGFQ99075 208 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 POLR1BQ9H9Y6 1135 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PALMDQ9NP74 551 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PILRBQ9UKJ0 227 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PCDHB14Q9Y5E9 798 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PCM1Q15154 2024 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 A0A096LPI6 279 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 DPM1O60762 260 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PSIP1O75475 530 aaKnown RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 KCNH1O95259 989 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 IL6P05231 212 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PGRP06401 933 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 ITIH1P19827 911 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 BCKDHBP21953 392 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 DCTP40126 519 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 CDKN2CP42773 168 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 RGS4P49798 205 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 CTSCP53634 463 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PLA2G16P53816 162 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 CSTF1Q05048 431 aaKnown RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PLCL1Q15111 1095 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 SPANXN4Q5MJ08 99 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 R3HCC1LQ7Z5L2 792 aaKnown RBP7.4□□□□□ -1.22
CDKL5-202ENST00000379996 CACUL1Q86Y37 369 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 L3MBTL4Q8NA19 623 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 METTL6Q8TCB7 284 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 GPBAR1Q8TDU6 330 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 ZFPM2Q8WW38 1151 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 RNF145Q96MT1 663 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 SEPHS2Q99611 448 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 TM9SF3Q9HD45 589 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 B3GNT3Q9Y2A9 372 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 DLGAP4Q9Y2H0 992 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 PCDHGA5Q9Y5G8 931 aa7.4□□□□□ -1.22
CDKL5-202ENST00000379996 A6NCN8 305 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 POM121BA6NF01 834 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 E5RI56 91 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 SLC28A1O00337 649 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 YKT6O15498 198 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.23
CDKL5-202ENST00000379996 BCKDHAP12694 445 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 ACADLP28330 430 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 CD38P28907 300 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 AKT1P31749 480 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 FZD2Q14332 565 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 FAM174BQ3ZCQ3 159 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 GPR107Q5VW38 600 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM220Q6QAJ8 160 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 Q6ZSR6 202 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 MSANTD1Q6ZTZ1 278 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 IFNEQ86WN2 208 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 ZCCHC7Q8N3Z6 543 aaKnown RBP7.4□□□□□ -1.23
CDKL5-202ENST00000379996 LIX1Q8N485 282 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 OR2T12Q8NG77 320 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 CEP76Q8TAP6 659 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 YIPF6Q96EC8 236 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 VPS50Q96JG6 964 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 BARD1Q99728 777 aaKnown RBP7.4□□□□□ -1.23
CDKL5-202ENST00000379996 OR2AG1Q9H205 316 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 OR52A5Q9H2C5 316 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 LIN7BQ9HAP6 207 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 SMURF2Q9HAU4 748 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 ENPP5Q9UJA9 477 aa7.4□□□□□ -1.23
CDKL5-202ENST00000379996 RNF103-CHMP3A0A140T963 221 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 K7EPI3 171 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 SCELO95171 688 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 EPN2O95208 641 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 CSF2P04141 144 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 ERGP11308 486 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 NME1P15531 152 aaKnown RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 IL7RP16871 459 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 RXRGP48443 463 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 PXNP49023 591 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 BLKP51451 505 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 CLDN8P56748 225 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 RPL38P63173 70 aaKnown RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 CD47Q08722 323 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 EIF2B5Q13144 721 aaKnown RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 SIM2Q14190 667 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 MOGQ16653 247 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 C6orf141Q5SZD1 244 aa7.39□□□□□ -1.23
CDKL5-202ENST00000379996 SHQ1Q6PI26 577 aaKnown RBP7.39□□□□□ -1.23
CDKL5-202ENST00000379996 MBOAT1Q6ZNC8 495 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms