RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KCNC2Q96PR1 638 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 SERPINI1Q99574 410 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 NPLQ9BXD5 320 aaPredicted RBP17.73■□□□□ 0.43
SSU72-203ENST00000378725 BRF2Q9HAW0 419 aa17.73■□□□□ 0.43
SSU72-203ENST00000378725 FARSBQ9NSD9 589 aaKnown RBP17.73■□□□□ 0.43
SSU72-203ENST00000378725 PTRH2Q9Y3E5 179 aaKnown RBP17.73■□□□□ 0.43
SSU72-203ENST00000378725 A0A088AWK7 358 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 CHST10O43529 356 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ULK1O75385 1050 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 SCELO95171 688 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 BMP10O95393 424 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ETHE1O95571 254 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 UMODP07911 640 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ZNF10P21506 573 aaPredicted RBP17.72■□□□□ 0.43
SSU72-203ENST00000378725 FOLR3P41439 243 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 TSFMP43897 325 aaKnown RBP17.72■□□□□ 0.43
SSU72-203ENST00000378725 MTTPP55157 894 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 FOXA1P55317 472 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 RUNX2Q13950 521 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 RCN2Q14257 317 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 UGT8Q16880 541 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 SGO1Q5FBB7 561 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ARL13AQ5H913 290 aaPredicted RBP17.72■□□□□ 0.43
SSU72-203ENST00000378725 TCHHL1Q5QJ38 904 aaPredicted RBP17.72■□□□□ 0.43
SSU72-203ENST00000378725 FAM219BQ5XKK7 198 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ZCCHC23Q6ZST2 131 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 TMEM151BQ8IW70 566 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ZC3H7AQ8IWR0 971 aaKnown RBP17.72■□□□□ 0.43
SSU72-203ENST00000378725 GOLGA6L1Q8N7Z2 621 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ANKRD42Q8N9B4 389 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 OR5T3Q8NGG3 340 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ADAMTS17Q8TE56 1095 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 RGMAQ96B86 450 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 KCNA7Q96RP8 456 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 SERINC2Q96SA4 455 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 YIPF2Q9BWQ6 316 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ROGDIQ9GZN7 287 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 PRORYQ9H606 182 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 TNFRSF12AQ9NP84 129 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 C14orf105Q9NVL8 296 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 HCN3Q9P1Z3 774 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 TIMM22Q9Y584 194 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 ACACAQ13085 2346 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 DMXL2Q8TDJ6 3036 aa17.72■□□□□ 0.43
SSU72-203ENST00000378725 A0A0G2JN53 185 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 WDR91A4D1P6 747 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ZNF860A6NHJ4 632 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 HMGB1P1B2RPK0 211 aaPredicted RBP17.71■□□□□ 0.43
SSU72-203ENST00000378725 PLPP1O14494 284 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 SH3BGRLO75368 114 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 SEMA3DO95025 777 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 FGF4P08620 206 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 HSD3B1P14060 373 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ATP5A1P25705 553 aaKnown RBP17.71■□□□□ 0.43
SSU72-203ENST00000378725 HSD3B2P26439 372 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 HMOX2P30519 316 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ARRB2P32121 409 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 FOXL2P58012 376 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 KLC1Q07866 573 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 IL10RAQ13651 578 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ERV3-1Q14264 604 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 CES4AQ5XG92 561 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 OR4C11Q6IEV9 310 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ATG14Q6ZNE5 492 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 CUZD1Q86UP6 607 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 LAPTM4BQ86VI4 370 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 HOMEZQ8IX15 550 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 CA13Q8N1Q1 262 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 NACC2Q96BF6 587 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 OR1F2PQ96R84 312 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 CENPKQ9BS16 269 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 ZNF717Q9BY31 904 aaPredicted RBP17.71■□□□□ 0.43
SSU72-203ENST00000378725 SOX17Q9H6I2 414 aaPredicted RBP17.71■□□□□ 0.43
SSU72-203ENST00000378725 EML4Q9HC35 981 aaKnown RBP17.71■□□□□ 0.43
SSU72-203ENST00000378725 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 FER1L5A0AVI2 2057 aa17.71■□□□□ 0.43
SSU72-203ENST00000378725 SAP18O00422 153 aaKnown RBP17.7■□□□□ 0.42
SSU72-203ENST00000378725 B3GALT2O43825 422 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 SERPINE1P05121 402 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 CHRNGP07510 517 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 FURINP09958 794 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 UROSP10746 265 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 HIST1H1TP22492 207 aaPredicted RBP17.7■□□□□ 0.42
SSU72-203ENST00000378725 XCR1P46094 333 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 CXADRP78310 365 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 OLR1P78380 273 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 CDC20Q12834 499 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 CHI3L2Q15782 390 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 AP5B1Q2VPB7 878 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 HHATQ5VTY9 493 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 C19orf48Q6RUI8 117 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 ZNF793Q6ZN11 406 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 GBP7Q8N8V2 638 aaPredicted RBP17.7■□□□□ 0.42
SSU72-203ENST00000378725 ACOT4Q8N9L9 421 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 PEX11GQ96HA9 241 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 SHCBP1LQ9BZQ2 653 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 ACBD3Q9H3P7 528 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 MLXIPLQ9NP71 852 aa17.7■□□□□ 0.42
SSU72-203ENST00000378725 SEMA3GQ9NS98 782 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms