RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 A0A0U1RQS6 177 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 TRBC2A0A5B9 178 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF432O94892 652 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 FPR1P21462 350 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 FOXA1P55317 472 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 LIPJQ5W064 366 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 FUBP1Q96AE4 644 aaKnown RBP14.49□□□□□ -0.09
NPHP4-201ENST00000378156 POLR2J2Q9GZM3 115 aaKnown RBP14.49□□□□□ -0.09
NPHP4-201ENST00000378156 EIF3KQ9UBQ5 218 aaKnown RBP14.49□□□□□ -0.09
NPHP4-201ENST00000378156 SPO11Q9Y5K1 396 aa14.49□□□□□ -0.09
NPHP4-201ENST00000378156 BCORQ6W2J9 1755 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 CPSF4LA6NMK7 179 aaKnown RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 AKAP8O43823 692 aaKnown RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 ABCB7O75027 752 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 BCHEP06276 602 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 HTR1EP28566 365 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 MLLT3P42568 568 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 HTR6P50406 440 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 RUNX3Q13761 415 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 COLEC12Q5KU26 742 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 HACD2Q6Y1H2 254 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 SCRN2Q96FV2 425 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 TRIB3Q96RU7 358 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 OR51V1Q9H2C8 321 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 PLOD2O00469 737 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 CLPXO76031 633 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 RASAL1O95294 804 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 PSKH1P11801 424 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 CLCN7P51798 805 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 MEF2AQ02078 507 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 WSCD2Q2TBF2 565 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 KHSRPQ92945 711 aaKnown RBP eCLIP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 MGME1Q9BQP7 344 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 CSNK1G1Q9HCP0 422 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 GLI3P10071 1580 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 VEGFDO43915 354 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 EEDO75530 441 aaKnown RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 PIGFQ07326 219 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-201ENST00000378156 NOXRED1Q6NXP6 359 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 SYCE2Q6PIF2 218 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 PKP4Q99569 1192 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 TUBA1CQ9BQE3 449 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 IFT27Q9BW83 186 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 GJD2Q9UKL4 321 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 MGAT4AQ9UM21 535 aa14.48□□□□□ -0.09
NPHP4-201ENST00000378156 PPP6CO00743 305 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SPINT3P49223 89 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 KANK2Q63ZY3 851 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ZC3H10Q96K80 434 aaKnown RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 BHLHE41Q9C0J9 482 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SLC6A15Q9H2J7 730 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ABCG2Q9UNQ0 655 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 TNRC6CQ9HCJ0 1690 aaKnown RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 OR6C70A6NIJ9 312 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 PDCD5O14737 125 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 XPNPEP2O43895 674 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 BCKDHAP12694 445 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 BPIP17213 487 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 TYRP1P17643 537 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SHMT2P34897 504 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 RAB39AQ14964 217 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF630Q2M218 657 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 TPRG1LQ5T0D9 272 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ULK3Q6PHR2 472 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SLC9B2Q86UD5 537 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ANKFN1Q8N957 763 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ARMC5Q96C12 935 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 CASD1Q96PB1 797 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 OR2M4Q96R27 311 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SLC29A1Q99808 456 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 A0A1W2PQU0 124 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SERPINA3P01011 423 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ZNF806P0C7X5 589 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 C1GALT1C1LP0DN25 315 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ACSL1P33121 698 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 GALNT1Q10472 559 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SLC30A6Q6NXT4 461 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 IQCHQ86VS3 1027 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ATCAYQ86WG3 371 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 DRAXINQ8NBI3 349 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 CST11Q9H112 138 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 PCTPQ9UKL6 214 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 PCDHB3Q9Y5E6 796 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 NHSL1Q5SYE7 1610 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 FOXD2O60548 495 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 PRAMEF12O95522 483 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SLC2A2P11168 524 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 ATP5A1P25705 553 aaKnown RBP14.47□□□□□ -0.09
NPHP4-201ENST00000378156 CCKBRP32239 447 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 EGFL6Q8IUX8 553 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 SCML4Q8N228 414 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 OR4K1Q8NGD4 311 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 OR8J3Q8NGG0 315 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 LMX1AQ8TE12 382 aa14.47□□□□□ -0.09
NPHP4-201ENST00000378156 KCTD7Q96MP8 289 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms