RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 PFKFB4Q16877 469 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 ZRANB3Q5FWF4 1079 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 SHQ1Q6PI26 577 aaKnown RBP14.08□□□□□ -0.15
UBA1-202ENST00000377269 TMEM92Q6UXU6 159 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 SLC46A3Q7Z3Q1 461 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 CACTIN-AS1Q8N1I8 211 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 DEPDC4Q8N2C3 294 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 FLCNQ8NFG4 579 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 SCAMP4Q969E2 229 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 MARVELD3Q96A59 401 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 C14orf119Q9NWQ9 140 aa14.08□□□□□ -0.15
UBA1-202ENST00000377269 NDRG4Q9ULP0 352 aaKnown RBP14.08□□□□□ -0.15
UBA1-202ENST00000377269 A0A1W2PQ72 361 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 GSTA4O15217 222 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 ZNF780AO75290 641 aaPredicted RBP14.08□□□□□ -0.16
UBA1-202ENST00000377269 SCELO95171 688 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 PRAMEF1O95521 474 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 S1PR4O95977 384 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 GLULP15104 373 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 VIPR1P32241 457 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 KRT20P35900 424 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 ARHGEF7Q14155 803 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 ERN2Q76MJ5 926 aaKnown RBP14.08□□□□□ -0.16
UBA1-202ENST00000377269 TSPYL5Q86VY4 417 aaPredicted RBP14.08□□□□□ -0.16
UBA1-202ENST00000377269 EXT2Q93063 718 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 CD93Q9NPY3 652 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 GMPPBQ9Y5P6 360 aa14.08□□□□□ -0.16
UBA1-202ENST00000377269 A0A1W2PP55 124 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 OR1I1O60431 355 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 TMCC2O75069 709 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 SEC22BO75396 215 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 RPLP0P05388 317 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 NAGAP17050 411 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 HOXB6P17509 224 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 CTRB1P17538 263 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 IL1RNP18510 177 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 CHRNA6Q15825 494 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 ATP6AP1LQ52LC2 224 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 GPAT3Q53EU6 434 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 CTRB2Q6GPI1 263 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 EFL1Q7Z2Z2 1120 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 RHEBL1Q8TAI7 183 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 ZFAND1Q8TCF1 268 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 TBC1D20Q96BZ9 403 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 FOXQ1Q9C009 403 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 ROGDIQ9GZN7 287 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 RIBC2Q9H4K1 309 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 DYRK4Q9NR20 520 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 TEX51A0A1B0GUA7 166 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 C1QTNF3-AMACRE9PGA6 284 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 IFRD1O00458 451 aaPredicted RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 RETP07949 1114 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 MSH3P20585 1137 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 HNF4AP41235 474 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 SPINT3P49223 89 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 STC1P52823 247 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 RPS14P62263 151 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 SLAMF1Q13291 335 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 OR4D1Q15615 310 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 TBCEQ15813 527 aaPredicted RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 ESCO2Q56NI9 601 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 PIP5KL1Q5T9C9 394 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 PIM3Q86V86 326 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 TP53I13Q8NBR0 393 aaPredicted RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 SNAPC3Q92966 411 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 FYTTD1Q96QD9 318 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 ATOH8Q96SQ7 321 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 RANGRFQ9HD47 186 aaPredicted RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 DCAF13Q9NV06 445 aaKnown RBP14.07□□□□□ -0.16
UBA1-202ENST00000377269 NUMA1Q14980 2115 aa14.07□□□□□ -0.16
UBA1-202ENST00000377269 OR5K3A6NET4 321 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 H7C0S8 307 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 NPC1O15118 1278 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 MMP20O60882 483 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 WBP4O75554 376 aaKnown RBP14.06□□□□□ -0.16
UBA1-202ENST00000377269 DNTTP04053 509 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 GRK5P34947 590 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 TAS2R38P59533 333 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 CSNK2BP67870 215 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 MRPS21P82921 87 aaKnown RBP14.06□□□□□ -0.16
UBA1-202ENST00000377269 C6orf136Q5SQH8 315 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 CPZQ66K79 652 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 KDM4DQ6B0I6 523 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 MRNIPQ6NTE8 343 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 ZNF852Q6ZMS4 543 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 AHSA2Q719I0 299 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 DPPA4Q7L190 304 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 ZNF687Q8N1G0 1237 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 OR2T11Q8NH01 316 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 ELMO1Q92556 727 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 GTF2H4Q92759 462 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 PPP1R16AQ96I34 528 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 SLC30A2Q9BRI3 323 aa14.06□□□□□ -0.16
UBA1-202ENST00000377269 ERVK13-1Q9NX77 482 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms