RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PDHA2P29803 388 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 RPL3P39023 403 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 PRKCDQ05655 676 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 FPGSQ05932 587 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 DNASE1L3Q13609 305 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 EXOC3L2Q2M3D2 409 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 BCL7AQ4VC05 210 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 NCCRP1Q6ZVX7 275 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CDC26Q8NHZ8 85 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SPPL2AQ8TCT8 520 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 IRF7Q92985 503 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CDCA4Q9BXL8 241 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SH3BP4Q9P0V3 963 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 KCND3Q9UK17 655 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ICKQ9UPZ9 632 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SH2B3Q9UQQ2 575 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF451Q9Y4E5 1061 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 MN1Q10571 1320 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 DSPPQ9NZW4 1301 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 C6orf47O95873 294 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 LRG1P02750 347 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 RPLP0P05388 317 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ARAFP10398 606 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 TNFRSF1BP20333 461 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 MMP12P39900 470 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CRATP43155 626 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SLC15A1P46059 708 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF630Q2M218 657 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SYTL3Q4VX76 610 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF770Q6IQ21 691 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 UNC5DQ6UXZ4 953 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SLC22A16Q86VW1 577 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 LGI4Q8N135 537 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 METTL4Q8N3J2 472 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 C16orf78Q8WTQ4 265 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 PIP5K1AQ99755 562 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 EFCAB11Q9BUY7 163 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 FTSJ1Q9UET6 329 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 PNMA8BQ9ULN7 279 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CFAP20Q9Y6A4 193 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 GNG14A0A1W2PPG7 69 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SH3D21A4FU49 640 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 NEDD8-MDP1E9PL57 170 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 C1GALT1C1LP0DN25 315 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 EPHA5P54756 1037 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 TBPL1P62380 186 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF45Q02386 682 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CCDC92Q53HC0 331 aaPredicted RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF805Q5CZA5 627 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 LIPIQ6XZB0 460 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 DSG4Q86SJ6 1040 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 ARMC8Q8IUR7 673 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 SLC30A8Q8IWU4 369 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 GPR156Q8NFN8 814 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 OR4K1Q8NGD4 311 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 NFKBIDQ8NI38 313 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CHAC2Q8WUX2 184 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 GEMIN6Q8WXD5 167 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 LRIG1Q96JA1 1093 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 FZD3Q9NPG1 666 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 GPR83Q9NYM4 423 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 CNOT2Q9NZN8 540 aaKnown RBP10.22□□□□□ -0.77
ABCF1-202ENST00000376545 TRIM17Q9Y577 477 aa10.22□□□□□ -0.77
ABCF1-202ENST00000376545 PRAMEF33A0A0G2JMD5 474 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 ZAR1LA6NP61 321 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 PSMD11O00231 422 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 PRAMEF10O60809 474 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 SOD1P00441 154 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 PTHP01270 115 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 OPN1SWP03999 348 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 RB1P06400 928 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 STSP08842 583 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 ADRA2AP08913 450 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 PIK3CBP42338 1070 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 OR1E2P47887 323 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 RGS6P49758 472 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 CLK1P49759 484 aaKnown RBP10.21□□□□□ -0.77
ABCF1-202ENST00000376545 SPIBQ01892 262 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF284Q2VY69 593 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 PNCKQ6P2M8 343 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 TRIM40Q6P9F5 258 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 CCDC149Q6ZUS6 474 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 TMCO2Q7Z6W1 182 aaPredicted RBP10.21□□□□□ -0.77
ABCF1-202ENST00000376545 TMPRSS11BQ86T26 416 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 C9orf43Q8TAL5 461 aaPredicted RBP10.21□□□□□ -0.77
ABCF1-202ENST00000376545 CIDECQ96AQ7 238 aaPredicted RBP10.21□□□□□ -0.77
ABCF1-202ENST00000376545 MAPKAP1Q9BPZ7 522 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 CENPOQ9BU64 300 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 SPHK2Q9NRA0 654 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 TAS2R9Q9NYW1 312 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 NDOR1Q9UHB4 597 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
ABCF1-202ENST00000376545 NOTCH4Q99466 2003 aa10.21□□□□□ -0.78
ABCF1-202ENST00000376545 PIPSLA2A3N6 862 aa10.21□□□□□ -0.78
ABCF1-202ENST00000376545 TLL1O43897 1013 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms