RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CD1EP15812 388 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 IL1RNP18510 177 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 IMPA1P29218 277 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 STX2P32856 288 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 GP5P40197 560 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 XCR1P46094 333 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 AVPR1BP47901 424 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 PGGT1BP53609 377 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 TAS2R39P59534 338 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 POU4F1Q01851 419 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 PRDX1Q06830 199 aaKnown RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 FAM53BQ14153 422 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 MEP1AQ16819 746 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 KBTBD12Q3ZCT8 623 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 ZNF468Q5VIY5 522 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 CPSF7Q8N684 471 aaKnown RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 TMEM178AQ8NBL3 297 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 OR51Q1Q8NH59 317 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 VKORC1Q9BQB6 163 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 POPDC3Q9HBV1 291 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 TXNDC16Q9P2K2 825 aa12.33□□□□□ -0.44
CLCN6-205ENST00000376492 C19orf25Q9UFG5 118 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 MTO1Q9Y2Z2 717 aaKnown RBP12.33□□□□□ -0.44
CLCN6-205ENST00000376492 SGK494L7N484 410 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 TXNDC9O14530 226 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 RIPK2O43353 540 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 CDC123O75794 336 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 CCNDBP1O95273 360 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 WISP3O95389 354 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 SP1P08047 785 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 ENO2P09104 434 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 HIST1H2AGP0C0S8 130 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 ZNF24P17028 368 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 ZNF37AP17032 561 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 IGFBP2P18065 325 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 HIST1H2ADP20671 130 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 SAT1P21673 171 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 PTGER1P34995 402 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 HSD17B3P37058 310 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 RELAQ04206 551 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 NAB1Q13506 487 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 EXT1Q16394 746 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 MAPKAPK3Q16644 382 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 NDUFA9Q16795 377 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 PHKG1Q16816 387 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 SFT2D3Q587I9 215 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 GRTP1Q5TC63 336 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 SLC25A25Q6KCM7 469 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 PAPD4Q6PIY7 484 aaKnown RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 VN1R4Q7Z5H5 301 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 MARVELD2Q8N4S9 558 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 M1APQ8TC57 530 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 NRGNQ92686 78 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 HIST1H2AHQ96KK5 128 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 GPR22Q99680 433 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 RBBP8Q99708 897 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 HIST1H2AJQ99878 128 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 H2AFJQ9BTM1 129 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 CDC42EP4Q9H3Q1 356 aaKnown RBP12.32□□□□□ -0.44
CLCN6-205ENST00000376492 MMP25Q9NPA2 562 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
CLCN6-205ENST00000376492 A0A087WUV0 522 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 FAM90A27PA6NNH2 459 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 H0YIG0 161 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 H7BY64 318 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 PRRG2O14669 202 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 NME2P1O60361 137 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 RDH16O75452 317 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 SLC25A12O75746 678 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 NSA2O95478 260 aaKnown RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 CYC1P08574 325 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 HOXB4P17483 251 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 NME2P22392 152 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 AP1S2P56377 157 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 ABATP80404 500 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 ABRAXAS2Q15018 415 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 CD163Q86VB7 1156 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 ZNF227Q86WZ6 799 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 PDSS2Q86YH6 399 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 TDRPQ86YL5 185 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 CTAGE3PQ8IX95 158 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 KIF2BQ8N4N8 673 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 SLC5A8Q8N695 610 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 PPM1NQ8N819 430 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 FAM98AQ8NCA5 519 aaKnown RBP12.31□□□□□ -0.44
CLCN6-205ENST00000376492 ZCCHC10Q8TBK6 192 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 TSLPQ969D9 159 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 PCBD2Q9H0N5 130 aa12.31□□□□□ -0.44
CLCN6-205ENST00000376492 MED4Q9NPJ6 270 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms