RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ANXA8P13928 327 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 JUPP14923 745 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SPINT3P49223 89 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GRSF1Q12849 480 aaKnown RBP eCLIP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KRT74Q7RTS7 529 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GGHQ92820 318 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 H7BY64 318 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ANKRD28O15084 1053 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GRM6O15303 877 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 UGT2B17O75795 530 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ETHE1O95571 254 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HLA-FP30511 346 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TBPL1P62380 186 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC35A2P78381 396 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IFITM3Q01628 133 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 DBPQ10586 325 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PIN1Q13526 163 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC16A12Q6ZSM3 486 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRSS48Q7RTY5 328 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SIX5Q8N196 739 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IPCEF1Q8WWN9 437 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 JPH3Q8WXH2 748 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRAP1Q96NZ9 151 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 F2RL3Q96RI0 385 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NTMT1Q9BV86 223 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRR14Q9BWN1 585 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FAM120CQ9NX05 1096 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SEC16AO15027 2179 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TBC1D3BA6NDS4 549 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FABP12A6NFH5 140 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TLR4O00206 839 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TEX28O15482 410 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TYRP14679 529 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZFP36L2P47974 494 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC5A12Q1EHB4 618 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SPATS1Q496A3 300 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 C22orf42Q6IC83 251 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 COMMD6Q7Z4G1 85 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RAB43Q86YS6 212 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SCAIQ8N9R8 606 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 XKR8Q9H6D3 395 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NECTIN3Q9NQS3 549 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF282Q9UDV7 671 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CCL26Q9Y258 94 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC9A8Q9Y2E8 581 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CARD8Q9Y2G2 431 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LEFTY2O00292 366 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 XKP51811 444 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GABARAPL2P60520 117 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IL18Q14116 193 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 B3GLCTQ6Y288 498 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WDR53Q7Z5U6 358 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NRTNQ99748 197 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KLF16Q9BXK1 252 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RPRD1BQ9NQG5 326 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NKIRAS2Q9NYR9 191 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CRNNQ9UBG3 495 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PEX16Q9Y5Y5 336 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CPSF4LA6NMK7 179 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MAGEA8P43361 318 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 AVPR1BP47901 424 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 DSTNP60981 165 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OLR1P78380 273 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HOXC5Q00444 222 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PTSQ03393 145 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TEAD4Q15561 434 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PROX2Q3B8N5 592 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CRB2Q5IJ48 1285 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 C9orf64Q5T6V5 341 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GTF2IRD2BQ6EKJ0 949 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ASB18Q6ZVZ8 466 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GTF2IRD2Q86UP8 949 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PARP16Q8N5Y8 322 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC9A6Q92581 669 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC12A9Q9BXP2 914 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TP63Q9H3D4 680 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC52A3Q9NQ40 469 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CCDC177Q9NQR7 707 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SPTBP11277 2137 aa13.8□□□□□ -0.2
TNFRSF1B-201ENST00000376259 POP7O75817 140 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SULT1C4O75897 302 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 EIF2S1P05198 315 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PSKH1P11801 424 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HMGA1P17096 107 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HNMTP50135 292 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TLE2Q04725 743 aa13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HNRNPA0Q13151 305 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PTGES3Q15185 160 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KRT73Q86Y46 540 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms