RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 CDK5RAP1Q96SZ6 601 aaKnown RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 DUSP21Q9H596 190 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 NECTIN3Q9NQS3 549 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 RNF186Q9NXI6 227 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 OR6C75A6NL08 312 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ARHGEF33A8MVX0 844 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 CCL16O15467 120 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 SERPINI2O75830 405 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 DDX5P17844 614 aaKnown RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PRPS1L1P21108 318 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TGFBR2P37173 567 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 RGS6P49758 472 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 GRIK2Q13002 908 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 SLC5A12Q1EHB4 618 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ASB18Q6ZVZ8 466 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 USP45Q70EL2 814 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 GALNT12Q8IXK2 581 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 CADM2Q8N3J6 435 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 GOLM1Q8NBJ4 401 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 OR5D16Q8NGK9 328 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 JPH3Q8WXH2 748 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 NEIL2Q969S2 332 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 CCL26Q9Y258 94 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PCDHGB3Q9Y5G1 929 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 SPIN1Q9Y657 262 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 SCN2AQ99250 2005 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TRIOO75962 3097 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 FEZF1A0PJY2 475 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 KLK8O60259 260 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 GASTP01350 101 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ADRA2AP08913 450 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PSKH1P11801 424 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TNFSF8P32971 234 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 BUD31P41223 144 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 CDC42P60953 191 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 RGNQ15493 299 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF57Q68EA5 555 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TMPRSS11AQ6ZMR5 421 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 USP43Q70EL4 1123 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 LHFPL3Q86UP9 236 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TSPYL5Q86VY4 417 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 KLHDC8BQ8IXV7 354 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 KBTBD8Q8NFY9 601 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 COQ8BQ96D53 544 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
MCF2L-202ENST00000375597 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
MCF2L-202ENST00000375597 A0A1W2PQ09 198 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 OR6C70A6NIJ9 312 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 M0R3H8 397 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ARHGAP33O14559 1287 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 MYL12BO14950 172 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 KMOO15229 486 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CCNB2O95067 398 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 RYKP34925 604 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CLCN4P51793 760 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 METAP1P53582 386 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 DSC1Q08554 894 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 DOC2BQ14184 412 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF517Q6ZMY9 492 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 USP30Q70CQ3 517 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TIGD4Q8IY51 512 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 KLK6Q92876 244 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 COL26A1Q96A83 441 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 LSM7Q9UK45 103 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 TMCC3Q9ULS5 477 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ANTXRLA6NF34 631 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CLCA1A8K7I4 914 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ZNF197O14709 1029 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PLD2O14939 933 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 NPPAP01160 153 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PRPS2P11908 318 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PPM1FP49593 454 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CDK6Q00534 326 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 BAK1Q16611 211 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 IFI44LQ53G44 452 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 ATAD3CQ5T2N8 411 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CASP12Q6UXS9 341 aa11.31□□□□□ -0.6
MCF2L-202ENST00000375597 CEACAM20Q6UY09 585 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms