RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DGKQP52824 942 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 INO80DQ53TQ3 878 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 C6orf136Q5SQH8 315 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF549Q6P9A3 640 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 LDB1Q86U70 411 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TCEAL8Q8IYN2 117 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CPA6Q8N4T0 437 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 FAM181AQ8N9Y4 354 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 LPCAT1Q8NF37 534 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF599Q96NL3 588 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 RACGAP1Q9H0H5 632 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 FAM25EA8MYX2 175 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ORC5O43913 435 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TSPAN12O95859 305 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 F11P03951 625 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 RAF1P04049 648 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TSPAN19P0C672 248 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ZDHHC11BP0C7U3 371 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CDH18Q13634 790 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TSTQ16762 297 aaKnown RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 COL28A1Q2UY09 1125 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 PTCHD3Q3KNS1 767 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TMEM207Q6UWW9 146 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CFAP77Q6ZQR2 320 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 MRPL43Q8N983 215 aaKnown RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 MYOCQ99972 504 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CNPPD1Q9BV87 410 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 SLC46A2Q9BY10 475 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 TMEM168Q9H0V1 697 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
C9orf3-203ENST00000375315 KCTD3Q9Y597 815 aa11.69□□□□□ -0.54
C9orf3-203ENST00000375315 CLEC2LP0C7M8 214 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 LINC00271P0C7V0 271 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CD1DP15813 335 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 AKT1P31749 480 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 WNT3AP56704 352 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 EIF4HQ15056 248 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 GLYR1Q49A26 553 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ZSWIM9Q86XI8 627 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CMTM8Q8IZV2 173 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 TAGAPQ8N103 731 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 C19orf18Q8NEA5 215 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 BTN2A2Q8WVV5 523 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ZSWIM3Q96MP5 696 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ZBTB18Q99592 522 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 SLC6A15Q9H2J7 730 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 LINC00597Q9H2U6 94 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CLEC4MQ9H2X3 399 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 RIMKLBQ9ULI2 386 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF490Q9ULM2 529 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 TNPO3Q9Y5L0 923 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 A0A1B0GVM2 712 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 EFEMP2O95967 443 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 PGRP06401 933 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 TPOP07202 933 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 RRASP10301 218 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 MAGEA2P43356 314 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 RGRP47804 291 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CDKN2DP55273 166 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 SCRN3Q0VDG4 424 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CSTF3Q12996 717 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CAMK2GQ13555 558 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 WSCD2Q2TBF2 565 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 LRRC66Q68CR7 880 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 KDELC1Q6UW63 502 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 FBXO39Q8N4B4 442 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 OR7G3Q8NG95 312 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 RIT1Q92963 219 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 CIDECQ96AQ7 238 aaPredicted RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 HRASLS5Q96KN8 279 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 MGLLQ99685 303 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 ELOVL6Q9H5J4 265 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 IL1RAPQ9NPH3 570 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 NOSIPQ9Y314 301 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 SAMHD1Q9Y3Z3 626 aaKnown RBP11.68□□□□□ -0.54
C9orf3-203ENST00000375315 VCANP13611 3396 aa11.68□□□□□ -0.54
C9orf3-203ENST00000375315 FAM240BA0A1B0GVZ2 78 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 SUPT3HB4E1H0 165 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 PLA2G10O15496 165 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF254O75437 659 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 FHP07954 510 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 RPS19P39019 145 aaKnown RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 S100A12P80511 92 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-203ENST00000375315 GPM6BQ13491 265 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 CAMK1Q14012 370 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 IHHQ14623 411 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 MED22Q15528 200 aa11.67□□□□□ -0.54
C9orf3-203ENST00000375315 ADGRF1Q5T601 910 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms