RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
UBR4-203ENST00000375225 TAS2R9Q9NYW1 312 aa11.72□□□□□ -0.53
UBR4-203ENST00000375225 GULP1Q9UBP9 304 aa11.72□□□□□ -0.53
UBR4-203ENST00000375225 ASF1AQ9Y294 204 aa11.72□□□□□ -0.53
UBR4-203ENST00000375225 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
UBR4-203ENST00000375225 A0A1W2PRB8 838 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 TBC1D3BA6NDS4 549 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 TMEM247A6NEH6 219 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 OTOL1A6NHN0 477 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 ANKDD1BA6NHY2 528 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 M0R3G1 203 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 TBX19O60806 448 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 LILRB5O75023 590 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ETHE1O95571 254 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 NTRK1P04629 796 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ZNF8P17098 575 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 AGXTP21549 392 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 PCMT1P22061 227 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 RRM2P31350 389 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 STT3AP46977 705 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 GALK1P51570 392 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 SLC35A2P78381 396 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 KCNJ10P78508 379 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 MLLT1Q03111 559 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 TAP2Q03519 686 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 PPP1R8Q12972 351 aaKnown RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 HEPACAMQ14CZ8 416 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 MAD2L1BPQ15013 274 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBR4-203ENST00000375225 C9orf64Q5T6V5 341 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 FAM71E1Q6IPT2 247 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ADAMTSL4Q6UY14 1074 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 CEP68Q76N32 757 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ZNF551Q7Z340 670 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 B3GNT8Q7Z7M8 397 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 LRRTM4Q86VH4 590 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 AMZ2Q86W34 360 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ARMC8Q8IUR7 673 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBR4-203ENST00000375225 CNIH3Q8TBE1 160 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ARRDC3Q96B67 414 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 DPH2Q9BQC3 489 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 HDAC8Q9BY41 377 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 NT5DC2Q9H857 520 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 GALNT8Q9NY28 637 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 ICKQ9UPZ9 632 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
UBR4-203ENST00000375225 ITM2BQ9Y287 266 aa11.71□□□□□ -0.53
UBR4-203ENST00000375225 TICRRQ7Z2Z1 1910 aa11.71□□□□□ -0.54
UBR4-203ENST00000375225 C5orf58C9J3I9 102 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 MPZL2O60487 215 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 MITFO75030 526 aaPredicted RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 GABARAPO95166 117 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 C6orf47O95873 294 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 B3GALT4O96024 378 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 TGFB1P01137 390 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 APODP05090 189 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CYP4B1P13584 511 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 ACADLP28330 430 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 SOAT1P35610 550 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 OPRD1P41143 372 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 PXNP49023 591 aaPredicted RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 TAS2R50P59544 299 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 RPP38P78345 283 aaKnown RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 CDK6Q00534 326 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CTBSQ01459 385 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 SPIBQ01892 262 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CNTN1Q12860 1018 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 GAB1Q13480 694 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 HTR4Q13639 388 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CRB2Q5IJ48 1285 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CATSPEREQ5SY80 951 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 KLHL35Q6PF15 583 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 NAGSQ8N159 534 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 PARP8Q8N3A8 854 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.7□□□□□ -0.543e-29■■■■□ 26.3
UBR4-203ENST00000375225 RASSF5Q8WWW0 418 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 NXPE3Q969Y0 559 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 HRASLS5Q96KN8 279 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 C7orf34Q96L11 122 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 ZNF451Q9Y4E5 1061 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 TNRC18O15417 2968 aaPredicted RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 KRT87PA6NCN2 255 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 ARRDC5A6NEK1 342 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 PRRT4C9JH25 899 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 ANHXE9PGG2 379 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 CACNB4O00305 520 aaPredicted RBP11.7□□□□□ -0.54
UBR4-203ENST00000375225 KDM1AO60341 852 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 MMP20O60882 483 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 TNFRSF21O75509 655 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 KAT7O95251 611 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 SOD1P00441 154 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 ARAFP10398 606 aa11.7□□□□□ -0.54
UBR4-203ENST00000375225 ZNF182P17025 639 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms