RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SLC1A7O00341 560 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC35G4P0C7Q5 338 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 CD247P20963 164 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 DNAJA1P31689 397 aaKnown RBP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 CYP2A13Q16696 494 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 SYCE2Q6PIF2 218 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 TSEN54Q7Z6J9 526 aaKnown RBP15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 SLC9B2Q86UD5 537 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 SPARTQ8N0X7 666 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 PARP8Q8N3A8 854 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 AMER3Q8N944 861 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 C7orf34Q96L11 122 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 EHD1Q9H4M9 534 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 MYO10Q9HD67 2058 aa15.28■□□□□ 0.04
CNKSR1-202ENST00000374253 ZBTB11O95625 1053 aaPredicted RBP15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 SCARB2Q14108 478 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 VEZF1Q14119 521 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 LCTLQ6UWM7 567 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 OR14C36Q8NHC7 312 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 HDAC2Q92769 488 aaKnown RBP15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 RAB7BQ96AH8 199 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 INSM2Q96T92 566 aaPredicted RBP15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 SLAMF7Q9NQ25 335 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 ATAD3AQ9NVI7 634 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 ADPRHL2Q9NX46 363 aa15.27■□□□□ 0.04
CNKSR1-202ENST00000374253 J3KTA2 159 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 M0QX08 132 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 OR1F1O43749 312 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 GPR37L1O60883 481 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 SNRNP200O75643 2136 aaKnown RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 APODP05090 189 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 FPR1P21462 350 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 PTX3P26022 381 aaPredicted RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 HNRNPFP52597 415 aaKnown RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 EPS8Q12929 822 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 CDK5R2Q13319 367 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 MLF2Q15773 248 aaPredicted RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 IQCCQ4KMZ1 466 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 FAM124AQ86V42 546 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 KRT78Q8N1N4 520 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 EZH1Q92800 747 aaPredicted RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 TAMM41Q96BW9 452 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 YTHDF1Q9BYJ9 559 aaKnown RBP15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 MYNNQ9NPC7 610 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 KRT84Q9NSB2 600 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 TAS2R9Q9NYW1 312 aa15.27■□□□□ 0.03
CNKSR1-202ENST00000374253 PRAMEF25A6NGN4 478 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 LCMT2O60294 686 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 ABCB7O75027 752 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 TNFRSF21O75509 655 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PCGF2P35227 344 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PIK3CBP42338 1070 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 GALK1P51570 392 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PLA2G16P53816 162 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PDE7AQ13946 482 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 RBM48Q5RL73 367 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 GCNT6Q5T4J0 391 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 KDM4DQ6B0I6 523 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 TNFAIP8L2Q6P589 184 aaPredicted RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PGBD3Q8N328 593 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 SETD7Q8WTS6 366 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 MENTQ9BUN1 341 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 ZNF717Q9BY31 904 aaPredicted RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 RSPH9Q9H1X1 276 aaPredicted RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 CXorf36Q9H7Y0 433 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 WARS2Q9UGM6 360 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 SH3GLB1Q9Y371 365 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 GMPPBQ9Y5P6 360 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 A0A1W2PPV9 198 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 SLC31A1O15431 190 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 PRKRAO75569 313 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 MAPK12P53778 367 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 ITGA1P56199 1179 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 HSPB3Q12988 150 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 RPS26P11Q5JNZ5 115 aaPredicted RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 KHDRBS2Q5VWX1 349 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 EXOSC8Q96B26 276 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 DOHHQ9BU89 302 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 TRIT1Q9H3H1 467 aaKnown RBP15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 TRPV4Q9HBA0 871 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 FBXL12Q9NXK8 326 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 KLHL20Q9Y2M5 609 aa15.26■□□□□ 0.03
CNKSR1-202ENST00000374253 GON4LQ3T8J9 2241 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SLC16A6O15403 523 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 INMTO95050 263 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 CPNE6O95741 557 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 ANGPTL1O95841 491 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 PCSK2P16519 638 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 PHEXP78562 749 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SKIV2LQ15477 1246 aaKnown RBP15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 SZRD1Q7Z422 152 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 OR13F1Q8NGS4 319 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 KCNC2Q96PR1 638 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 RLIMQ9NVW2 624 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 NDUFAF4Q9P032 175 aa15.25■□□□□ 0.03
CNKSR1-202ENST00000374253 RHCGQ9UBD6 479 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms