RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 USP3Q9Y6I4 520 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 C1orf226A1L170 272 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 AP1G1O43747 822 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PLOD3O60568 738 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SH3BGRLO75368 114 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 ALPPL2P10696 532 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 GRM2Q14416 872 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 RAB39AQ14964 217 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CTC1Q2NKJ3 1217 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CDHR3Q6ZTQ4 885 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 RBM12BQ8IXT5 1001 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 FIBINQ8TAL6 211 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 ADAMTS16Q8TE57 1224 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 LINC01599Q8WXQ3 324 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SLC9A6Q92581 669 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CDADC1Q9BWV3 514 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SLC22A14Q9Y267 594 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 PLOD2O00469 737 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 SCAMP2O15127 329 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 TNFP01375 233 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 NELFEP18615 380 aaKnown RBP10.22□□□□□ -0.77
PGK1-201ENST00000373316 HK1P19367 917 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 BMP8BP34820 402 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 LRRN1Q6UXK5 716 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 BMP8AQ7Z5Y6 402 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 ISCA2Q86U28 154 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 CD180Q99467 661 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 G6PC3Q9BUM1 346 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 TMEM184CQ9NVA4 438 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 FAM118AQ9NWS6 357 aa10.22□□□□□ -0.77
PGK1-201ENST00000373316 LOC285095A0A1B0GVY8 99 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 TCRBV5S1A1TA0A578 114 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 OR51F1A6NGY5 319 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 TOR1BO14657 336 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 GRID2O43424 1007 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ANXA2P07355 339 aaKnown RBP10.21□□□□□ -0.77
PGK1-201ENST00000373316 AQP1P29972 269 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 PGFP49763 221 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ARHGAP19Q14CB8 494 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.21□□□□□ -0.772e-7■■□□□ 13.6
PGK1-201ENST00000373316 RNF44Q7L0R7 432 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 NEDD4LQ96PU5 975 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 PRODH2Q9UF12 536 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 CDH7Q9ULB5 785 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 MYO9BQ13459 2157 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 A0A0G2JPF8 293 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 HNRNPCL3B7ZW38 293 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 HNRNPCL4P0DMR1 293 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ATF6P18850 670 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 FMO3P31513 532 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 PCGF2P35227 344 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 RASGEF1BQ0VAM2 473 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 RAB33AQ14088 237 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 PNCKQ6P2M8 343 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 VITQ6UXI7 678 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ZNF517Q6ZMY9 492 aaPredicted RBP10.21□□□□□ -0.77
PGK1-201ENST00000373316 ANKRD46Q86W74 232 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 HTRA1Q92743 480 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 GLYATL1Q969I3 302 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 TESCQ96BS2 214 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 RNF31Q96EP0 1072 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 ZNF354BQ96LW1 612 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 CCDC115Q96NT0 180 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 Q9N2J8 555 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 SERINC1Q9NRX5 453 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 TMLHEQ9NVH6 421 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 RNF11Q9Y3C5 154 aa10.21□□□□□ -0.77
PGK1-201ENST00000373316 EMC8O43402 210 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 NDUFB5O43674 189 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 GALTP07902 379 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 T-ENOLP0DO92 83 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 GJA8P48165 433 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 ACTA2P62736 377 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 ACTG2P63267 376 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 MGAT3Q09327 533 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 PROX2Q3B8N5 592 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 CEACAM20Q6UY09 585 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 PIM3Q86V86 326 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 TMEM173Q86WV6 379 aaPredicted RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 TSEN15Q8WW01 171 aaKnown RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 OR2B2Q9GZK3 357 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 SIAEQ9HAT2 523 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 KCNK13Q9HB14 408 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 ASIC5Q9NY37 505 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 STOX2Q9P2F5 926 aaPredicted RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 SLC17A6Q9P2U8 582 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 FAM170BA6NMN3 283 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 TMEM233B4DJY2 109 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 H3BUI4 141 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 LEFTY2O00292 366 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 CCL22O00626 93 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 NDUFS4O43181 175 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 NOS1APO75052 506 aaPredicted RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 POP7O75817 140 aaKnown RBP10.21□□□□□ -0.78
PGK1-201ENST00000373316 CLDN7O95471 211 aa10.21□□□□□ -0.78
PGK1-201ENST00000373316 BCKDHAP12694 445 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms