RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 KCNK6Q9Y257 313 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 NUP214P35658 2090 aaPredicted RBP12.8□□□□□ -0.36
CSTF2-201ENST00000372972 F5P12259 2224 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 LOC100130705A0A1B0GUX0 176 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 FEZF1A0PJY2 475 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 SUV39H1O43463 412 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 LATO43561 262 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 TNFRSF21O75509 655 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 ETFAP13804 333 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 DNAJA1P31689 397 aaKnown RBP12.8□□□□□ -0.36
CSTF2-201ENST00000372972 BSGP35613 385 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 IGFALSP35858 605 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 RAB28P51157 221 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 MAPK12P53778 367 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 ADPRHP54922 357 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 CYP4F2P78329 520 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 RBBP4Q09028 425 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 FADDQ13158 208 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 KRT33BQ14525 404 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 PRSS53Q2L4Q9 553 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 COX20Q5RI15 118 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 TRIM40Q6P9F5 258 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 NRBF2Q96F24 287 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 QRFPRQ96P65 431 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 GABARAPL1Q9H0R8 117 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 SLC6A17Q9H1V8 727 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 IMP3Q9NV31 184 aaKnown RBP12.8□□□□□ -0.36
CSTF2-201ENST00000372972 TAAR2Q9P1P5 351 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
CSTF2-201ENST00000372972 MOSPD1Q9UJG1 213 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
CSTF2-201ENST00000372972 A0A1W2PQF6 199 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PRR19A6NJB7 356 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 MYO1GB0I1T2 1018 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 CACNB4O00305 520 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 SLC16A6O15403 523 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 CAPN5O15484 640 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 OR1F1O43749 312 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 DPM1O60762 260 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 KRT75O95678 551 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 DDCP20711 480 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 COL9A1P20849 921 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 FPR1P21462 350 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 ELK4P28324 431 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 CHI3L1P36222 383 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PIGAP37287 484 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PRIM2P49643 509 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 CRYBA2P53672 197 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 TPD52P55327 224 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PRDX1Q06830 199 aaKnown RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 CLCA4Q14CN2 919 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 RBM48Q5RL73 367 aaKnown RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 GPR141Q7Z602 305 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 NATD1Q8N6N6 113 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 TM4SF18Q96CE8 201 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 DOHHQ9BU89 302 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 NPLQ9BXD5 320 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 RAB11FIP5Q9BXF6 653 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 ZNF717Q9BY31 904 aaPredicted RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 TMEM38AQ9H6F2 299 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PREBQ9HCU5 417 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 C1GALT1Q9NS00 363 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
CSTF2-201ENST00000372972 SCML1Q9UN30 329 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PLEKHM1Q9Y4G2 1056 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
CSTF2-201ENST00000372972 UNC80Q8N2C7 3258 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 RTCAO00442 366 aaKnown RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 MBTPS2O43462 519 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 TBX19O60806 448 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 GCM2O75603 506 aaPredicted RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 HOXB2P14652 356 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 AQP1P29972 269 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 MAT2AP31153 395 aaKnown RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 RXRGP48443 463 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 CDK9P50750 372 aaKnown RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 SELENOWP63302 87 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 CSNK1G2P78368 415 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 KCNJ10P78508 379 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 HEPACAMQ14CZ8 416 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 SLC5A12Q1EHB4 618 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 GCNT6Q5T4J0 391 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 CEP68Q76N32 757 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 ADGRF3Q8IZF5 1079 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 OR2L8Q8NGY9 312 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 HDAC2Q92769 488 aaKnown RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 RGMAQ96B86 450 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 MPP4Q96JB8 637 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 C7orf34Q96L11 122 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 C8orf33Q9H7E9 229 aaPredicted RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 MVB12BQ9H7P6 319 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 SLC31A1O15431 190 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 DIRAS1O95057 198 aa12.78□□□□□ -0.36
CSTF2-201ENST00000372972 DDX5P17844 614 aaKnown RBP12.78□□□□□ -0.36
CSTF2-201ENST00000372972 DRD1P21728 446 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms