RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 LAS2Q8IYD9 372 aa12.22□□□□□ -0.45
CTPS1-202ENST00000372621 AMER2Q8N7J2 671 aa12.22□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF480Q8WV37 535 aa12.22□□□□□ -0.45
CTPS1-202ENST00000372621 ERLEC1Q96DZ1 483 aa12.22□□□□□ -0.45
CTPS1-202ENST00000372621 TCF25Q9BQ70 676 aa12.22□□□□□ -0.45
CTPS1-202ENST00000372621 PCDH17O14917 1159 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 GPR37L1O60883 481 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 MAPK9P45984 424 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 MC1RQ01726 317 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 ZNF45Q02386 682 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 TPRG1LQ5T0D9 272 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 PNCKQ6P2M8 343 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 ANGPTL8Q6UXH0 198 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 OXR1Q8N573 874 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 FBXO15Q8NCQ5 510 aaPredicted RBP12.21□□□□□ -0.45
CTPS1-202ENST00000372621 GLYATL1Q969I3 302 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 REPS1Q96D71 796 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 CRELD1Q96HD1 420 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 PIP5K1AQ99755 562 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 CENPOQ9BU64 300 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 C6orf62Q9GZU0 229 aaPredicted RBP12.21□□□□□ -0.45
CTPS1-202ENST00000372621 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 ACSL6Q9UKU0 697 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 KLK4Q9Y5K2 254 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.45
CTPS1-202ENST00000372621 KIAA1549LQ6ZVL6 1849 aa12.21□□□□□ -0.45
CTPS1-202ENST00000372621 PRAMEF33A0A0G2JMD5 474 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 NEDD8-MDP1E9PL57 170 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 PRAMEF10O60809 474 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 C1orf105O95561 183 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 GBAP04062 536 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 CTSLP07711 333 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.46
CTPS1-202ENST00000372621 CBLP22681 906 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 TBPL1P62380 186 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 TMEM115Q12893 351 aaPredicted RBP12.21□□□□□ -0.46
CTPS1-202ENST00000372621 SLC5A12Q1EHB4 618 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 ARMCX4Q5H9R4 360 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 FAM71E1Q6IPT2 247 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.46
CTPS1-202ENST00000372621 PARP16Q8N5Y8 322 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 B3GNT7Q8NFL0 401 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 KBTBD8Q8NFY9 601 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 GEMIN6Q8WXD5 167 aaKnown RBP12.21□□□□□ -0.46
CTPS1-202ENST00000372621 CDCA4Q9BXL8 241 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 DMRT3Q9NQL9 472 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 MS4A12Q9NXJ0 267 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 IFT52Q9Y366 437 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 GPC6Q9Y625 555 aaPredicted RBP12.21□□□□□ -0.46
CTPS1-202ENST00000372621 LAMA3Q16787 3333 aa12.21□□□□□ -0.46
CTPS1-202ENST00000372621 M0R129 80 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TBX1O43435 398 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 CDK6Q00534 326 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 PTGES3Q15185 160 aaKnown RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 CYP27C1Q4G0S4 372 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 STX19Q8N4C7 294 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 C16orf78Q8WTQ4 265 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TMEM165Q9HC07 324 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 MYNNQ9NPC7 610 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF229Q9UJW7 825 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 HCN4Q9Y3Q4 1203 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 LTBP2Q14767 1821 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 CCDC88CQ9P219 2028 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ARRDC5A6NEK1 342 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 KCNK2O95069 426 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 SERPINB1P30740 379 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ETV6P41212 452 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 DOC2BQ14184 412 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF630Q2M218 657 aaPredicted RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ARSIQ5FYB1 569 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF770Q6IQ21 691 aaPredicted RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 DPPA4Q7L190 304 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 RNF130Q86XS8 419 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 WDR48Q8TAF3 677 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TXNDC15Q96J42 360 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 MRGPRX3Q96LB0 322 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TMEM121BQ9BXQ6 578 aaPredicted RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 FTSJ1Q9UET6 329 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 LOC100506127A0A0U1RQW1 187 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZAR1LA6NP61 321 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 POLR2EP19388 210 aaKnown RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 CCR2P41597 374 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 PRIM2P49643 509 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 UGT2B15P54855 530 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 OLR1P78380 273 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF284Q2VY69 593 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 TRIM40Q6P9F5 258 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF367Q7RTV3 350 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 ATCAYQ86WG3 371 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 LRRC56Q8IYG6 542 aaPredicted RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 PPCDCQ96CD2 204 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 FAM129BQ96TA1 746 aa12.2□□□□□ -0.46
CTPS1-202ENST00000372621 WRAP53Q9BUR4 548 aaKnown RBP12.2□□□□□ -0.46
CTPS1-202ENST00000372621 SGPP1Q9BX95 441 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms