RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 ADORA3P0DMS8 318 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 CHI3L1P36222 383 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 C2orf80Q0P641 193 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 ST3GAL4Q11206 333 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 ELOAQ14241 798 aaKnown RBP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 SLBPQ14493 270 aaKnown RBP eCLIP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 ARMCX6Q7L4S7 300 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 LYSMD2Q8IV50 215 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 OXR1Q8N573 874 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 SORCS1Q8WY21 1168 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 AP2M1Q96CW1 435 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 VPS35Q96QK1 796 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 EHD1Q9H4M9 534 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 TMEM38AQ9H6F2 299 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 C1GALT1Q9NS00 363 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 SCHIP1Q9P0W5 487 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 NFKBIL1Q9UBC1 381 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-202ENST00000372237 DUSP12Q9UNI6 340 aa18.34■□□□□ 0.53
TMEM53-202ENST00000372237 PRRC2BQ5JSZ5 2229 aaKnown RBP18.33■□□□□ 0.53
TMEM53-202ENST00000372237 AGAP5A6NIR3 686 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 TAF4O00268 1085 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 TLL1O43897 1013 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 SRPRAP08240 638 aaKnown RBP18.33■□□□□ 0.53
TMEM53-202ENST00000372237 CSF2RAP15509 400 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 SERPINB1P30740 379 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 CYP4F2P78329 520 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 CDK6Q00534 326 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 SLC13A2Q13183 592 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 STARD3Q14849 445 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 FBXO43Q4G163 708 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 TMEM215Q68D42 235 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 TUBA3EQ6PEY2 450 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 TECPR1Q7Z6L1 1165 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 RNF130Q86XS8 419 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 ARMC8Q8IUR7 673 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 LACC1Q8IV20 430 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 OR51B5Q9H339 312 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 SACM1LQ9NTJ5 587 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 DYRK1BQ9Y463 629 aa18.33■□□□□ 0.53
TMEM53-202ENST00000372237 HELZP42694 1942 aaKnown RBP18.33■□□□□ 0.53
TMEM53-202ENST00000372237 ISPDA4D126 451 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 TBX1O43435 398 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 GPR37L1O60883 481 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 LILRB3O75022 631 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 C1orf105O95561 183 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 PTHP01270 115 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 ELFN1P0C7U0 828 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 NPPBP16860 134 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 GABRB1P18505 474 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 POLR2EP19388 210 aaKnown RBP18.33■□□□□ 0.52
TMEM53-202ENST00000372237 GRK5P34947 590 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 NNMTP40261 264 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 CCR2P41597 374 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 SLC5A12Q1EHB4 618 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 ARMCX4Q5H9R4 360 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 C10orf62Q5T681 223 aaPredicted RBP18.33■□□□□ 0.52
TMEM53-202ENST00000372237 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.33■□□□□ 0.52
TMEM53-202ENST00000372237 KBTBD8Q8NFY9 601 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 GEMIN6Q8WXD5 167 aaKnown RBP18.33■□□□□ 0.52
TMEM53-202ENST00000372237 IRF7Q92985 503 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 SP140LQ9H930 580 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 TRIM39Q9HCM9 518 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 SH2B3Q9UQQ2 575 aa18.33■□□□□ 0.52
TMEM53-202ENST00000372237 FAM32AQ9Y421 112 aaKnown RBP18.33■□□□□ 0.52
TMEM53-202ENST00000372237 TRIM43BA6NCK2 446 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 SAGE2PA6NJ88 616 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 A8MVJ9 347 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 M0R129 80 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 FOXE1O00358 373 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 PCDH17O14917 1159 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 IFNA14P01570 189 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 CTSLP07711 333 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 HSMCR30P0CW71 290 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 S100A5P33763 92 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 RPL3P39023 403 aaKnown RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 TEKQ02763 1124 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 FOXD4Q12950 439 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 GANABQ14697 944 aaKnown RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 LRRC26Q2I0M4 334 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 MPEG1Q2M385 716 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 CCDC80Q76M96 950 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 ABHD8Q96I13 439 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 RAD9AQ99638 391 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 PIP5K1AQ99755 562 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 EFCAB11Q9BUY7 163 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 TMEM121BQ9BXQ6 578 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 OR51E2Q9H255 320 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 MTG2Q9H4K7 406 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 DMRT3Q9NQL9 472 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 MS4A12Q9NXJ0 267 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 TAS2R9Q9NYW1 312 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 WDR37Q9Y2I8 494 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 PIPSLA2A3N6 862 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 DSCR3O14972 297 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 CCL16O15467 120 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 SOAT1P35610 550 aa18.32■□□□□ 0.52
TMEM53-202ENST00000372237 MAGEA10P43363 369 aaPredicted RBP18.32■□□□□ 0.52
TMEM53-202ENST00000372237 TAS2R50P59544 299 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms