RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 BHLHE41Q9C0J9 482 aaPredicted RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 BTBD1Q9H0C5 482 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 RSPH9Q9H1X1 276 aaPredicted RBP13.49□□□□□ -0.25
LDB3-204ENST00000372066 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 DMRT3Q9NQL9 472 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ATAD3AQ9NVI7 634 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ATP6V1HQ9UI12 483 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 RPS6KA6Q9UK32 745 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PCDHB11Q9Y5F2 797 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PCDHGB5Q9Y5G0 923 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 PCDHGB2Q9Y5G2 931 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SNX11Q9Y5W9 270 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 V9GYQ6 96 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 SPEGQ15772 3267 aa13.49□□□□□ -0.25
LDB3-204ENST00000372066 ZFYVE26Q68DK2 2539 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 A0A087WXM4 84 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PIPSLA2A3N6 862 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 TRIM64A6NGJ6 449 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 FLRT2O43155 660 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PCDH7O60245 1069 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 BMP10O95393 424 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 SEMA4FO95754 770 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 CST1P01037 141 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 DNTTP04053 509 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 C5AR1P21730 350 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 SOX11P35716 441 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 CDKN2CP42773 168 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 RAE1P78406 368 aaKnown RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 ADARB1P78563 741 aaKnown RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 TAP2Q03519 686 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 ZNF763Q0D2J5 394 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 VEZF1Q14119 521 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
LDB3-204ENST00000372066 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PRAMEF14Q5SWL7 426 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 CPTPQ5TA50 214 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PRAMEF13Q5VWM6 474 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 DOK6Q6PKX4 331 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 CRTC3Q6UUV7 619 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 KRT78Q8N1N4 520 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 TRIML2Q8N7C3 387 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 OR7A2PQ8NGA2 310 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 PYURFQ96I23 114 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 PITHD1Q9GZP4 211 aaPredicted RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 PCBD2Q9H0N5 130 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 CAAP1Q9H8G2 361 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 TM9SF3Q9HD45 589 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 SLC6A13Q9NSD5 602 aa13.48□□□□□ -0.25
LDB3-204ENST00000372066 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.48□□□□□ -0.25
LDB3-204ENST00000372066 ATRXP46100 2492 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 KMOO15229 486 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PRKD3O94806 890 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 THRBP10828 461 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 ATP6V1B1P15313 513 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 DDX5P17844 614 aaKnown RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 DRD3P35462 400 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 MAGEA2P43356 314 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 RPS13P62277 151 aaKnown RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 CDK3Q00526 305 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 NFE2L1Q14494 772 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 CST6Q15828 149 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 CYP2A13Q16696 494 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 VMACQ2NL98 169 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 RFX4Q33E94 735 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 TTC23Q5W5X9 447 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 SLC30A9Q6PML9 568 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 ENPP6Q6UWR7 440 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 IKBIPQ70UQ0 350 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 HIPK1Q86Z02 1210 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 OR5K1Q8NHB7 308 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PNPT1Q8TCS8 783 aaKnown RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 GANCQ8TET4 914 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 CYGBQ8WWM9 190 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 AURKBQ96GD4 344 aaPredicted RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 RBM4BQ9BQ04 359 aaKnown RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 RBM4Q9BWF3 364 aaKnown RBP13.47□□□□□ -0.25
LDB3-204ENST00000372066 GRIP2Q9C0E4 1043 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PELI2Q9HAT8 420 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 MYNNQ9NPC7 610 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 AASDHPPTQ9NRN7 309 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
LDB3-204ENST00000372066 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms