RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 KCTD14Q9BQ13 255 aaPredicted RBP25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 THUMPD3Q9BV44 507 aaKnown RBP25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 KLHL25Q9H0H3 589 aa25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 ABCG4Q9H172 646 aa25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 MUC13Q9H3R2 512 aa25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 NEUROG3Q9Y4Z2 214 aa25.04■■□□□ 1.6
ATPAF1-202ENST00000371937 DNAH14Q0VDD8 3507 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 TNRC6BQ9UPQ9 1833 aaKnown RBP25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 URADA6NGE7 173 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 DDCP20711 480 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 HIST1H1TP22492 207 aaPredicted RBP25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 HOXD12P35452 270 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 GSK3BP49841 420 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 ERFP50548 548 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 MTPNP58546 118 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 PPP1CAP62136 330 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 SLC9A5Q14940 896 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 RNF44Q7L0R7 432 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 GAL3ST3Q96A11 431 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 ECSITQ9BQ95 431 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 PRDM7Q9NQW5 492 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 CROCCQ5TZA2 2017 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 CACNA1EQ15878 2313 aa25.03■■□□□ 1.6
ATPAF1-202ENST00000371937 TMPRSS11DO60235 418 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 TBX19O60806 448 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 GUCY1B2O75343 617 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 CDH3P22223 829 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 PTPN6P29350 595 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 PEAR1Q5VY43 1037 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 PACS2Q86VP3 889 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 DHFR2Q86XF0 187 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 ZCCHC7Q8N3Z6 543 aaKnown RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 NATD1Q8N6N6 113 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 ZNF655Q8N720 491 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 MIEF2Q96C03 454 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 STX18Q9P2W9 335 aaKnown RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 A0A0G2JN53 185 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 NUDT21O43809 227 aaKnown RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 B3GALT4O96024 378 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 HOXB9P17482 250 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 ATP5A1P25705 553 aaKnown RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 SHBQ15464 509 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 ZNF793Q6ZN11 406 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 RABEPKQ7Z6M1 372 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 IFNEQ86WN2 208 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 ROGDIQ9GZN7 287 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 S100A14Q9HCY8 104 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 SLC6A13Q9NSD5 602 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 LRIT1Q9P2V4 623 aa25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 NKX1-2Q9UD57 310 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-202ENST00000371937 NVLO15381 856 aaKnown RBP25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 GSNP06396 782 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 FAM58BPP0C7Q3 252 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 CDKN2CP42773 168 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF528Q3MIS6 628 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF385BQ569K4 471 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 MANEAQ5SRI9 462 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 IRGCQ6NXR0 463 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 TICAM1Q8IUC6 712 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 ACOT4Q8N9L9 421 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF764Q96H86 408 aaPredicted RBP25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 TRIM15Q9C019 465 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 C1GALT1Q9NS00 363 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 PCDHGB4Q9UN71 923 aa25.01■■□□□ 1.59
ATPAF1-202ENST00000371937 GPR37L1O60883 481 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 CPSF4O95639 269 aaKnown RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 DRD2P14416 443 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 HTR1EP28566 365 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 PPM1FP49593 454 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 SELPLGQ14242 412 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 GTDC1Q4AE62 458 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 ZNF621Q6ZSS3 439 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 PTRH1Q86Y79 214 aaKnown RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 CLECL1Q8IZS7 167 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 KCT2Q8NC54 265 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 OR8K5Q8NH50 307 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 LRGUKQ96M69 825 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 TRAPPC9Q96Q05 1148 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 FAIM2Q9BWQ8 316 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 RAB33BQ9H082 229 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 COPS7BQ9H9Q2 264 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 ZSCAN32Q9NX65 697 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 ACTR3BQ9P1U1 418 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 GMPR2Q9P2T1 348 aaKnown RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 RNF215Q9Y6U7 377 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 C4orf51C9J302 202 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 H0YGG7 62 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 ZSCAN9O15535 394 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 ST6GAL1P15907 406 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 EPHA8P29322 1005 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 ATXN3P54252 364 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 RAB8AP61006 207 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 ARF3P61204 181 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 SLAMF1Q13291 335 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 AMER3Q8N944 861 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 CEP76Q8TAP6 659 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 PYDC1Q8WXC3 89 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 PHF12Q96QT6 1004 aa25■■□□□ 1.59
ATPAF1-202ENST00000371937 CPPED1Q9BRF8 314 aaPredicted RBP25■■□□□ 1.59
ATPAF1-202ENST00000371937 EPB41L1Q9H4G0 881 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms