RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HEMK1Q9Y5R4 338 aaPredicted RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 GMEB1Q9Y692 573 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 CFAP20Q9Y6A4 193 aaKnown RBP9.96□□□□□ -0.82
COL5A1-202ENST00000371820 BSNQ9UPA5 3926 aa9.96□□□□□ -0.82
COL5A1-202ENST00000371820 HECTD1Q9ULT8 2610 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 RNF103-CHMP3A0A140T963 221 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 DHRS12A0PJE2 317 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 CCDC78A2IDD5 438 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 FAM234BA2RU67 622 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 CCDC162PA2VCL2 907 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 PRORSD1PA6NEY8 169 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF891A8MT65 544 aaPredicted RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 H0YAE9 185 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 H3BMM5 538 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 TERTO14746 1132 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 AKAP10O43572 662 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 KLK8O60259 260 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 TRMUO75648 421 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 DNAJB5O75953 348 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SORBS2O94875 1100 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ESRRBO95718 433 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 GOT2P00505 430 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SMIM18P0DKX4 95 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SFTPCP11686 197 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF37AP17032 561 aaPredicted RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 NELFEP18615 380 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 MYF6P23409 242 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ALDH3B2P48448 385 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SEPHS1P49903 392 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 RPS6KA3P51812 740 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 IL2P60568 153 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ERVK-8P63133 956 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 CYP4F2P78329 520 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 MYBPC1Q00872 1141 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 MC1RQ01726 317 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 NADK2Q4G0N4 442 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SYTL3Q4VX76 610 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 DUS1LQ6P1R4 473 aaKnown RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 FAM92BQ6ZTR7 304 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 CARM1Q86X55 608 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 PPP1R3BQ86XI6 285 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 DDIASQ8IXT1 998 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 PHC3Q8NDX5 983 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ZFP28Q8NHY6 868 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 MIPOL1Q8TD10 442 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 JPH3Q8WXH2 748 aaPredicted RBP9.95□□□□□ -0.82
COL5A1-202ENST00000371820 LRTOMTQ8WZ04 291 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 PMEPA1Q969W9 287 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 NRBF2Q96F24 287 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 FERD3LQ96RJ6 166 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 ATOH8Q96SQ7 321 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 OSBPL10Q9BXB5 764 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 APMAPQ9HDC9 416 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 UBAP1Q9NZ09 502 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 SEMA5BQ9P283 1151 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 RARRES3Q9UL19 164 aa9.95□□□□□ -0.82
COL5A1-202ENST00000371820 UBR5O95071 2799 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 CCDC154A6NI56 674 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TRIM64CA6NLI5 447 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 UBXN8O00124 270 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 NOL3O60936 208 aaKnown RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 EEDO75530 441 aaKnown RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 SLC22A3O75751 556 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ZBTB11O95625 1053 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 DLGAP3O95886 979 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ESR1P03372 595 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 FGF5P12034 268 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 PKMP14618 531 aaKnown RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TCN1P20061 433 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 GRIA3P42263 894 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 CDKN1CP49918 316 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ERFP50548 548 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 SLC7A2P52569 658 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 HSD11B2P80365 405 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 MERTKQ12866 999 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TOP3AQ13472 1001 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 MYBPC3Q14896 1274 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 PFKFB4Q16877 469 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ZBED5Q49AG3 693 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TTC33Q6PID6 262 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 GPR141Q7Z602 305 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 PIANPQ8IYJ0 282 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 DHRSXQ8N5I4 330 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 CLDN19Q8N6F1 224 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 GLB1L3Q8NCI6 653 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 OR8K5Q8NH50 307 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 LCN9Q8WX39 176 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ELMO1Q92556 727 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TFGQ92734 400 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 TFAP2CQ92754 450 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 SLC41A2Q96JW4 573 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 MAGEB10Q96LZ2 347 aaPredicted RBP9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ZBTB18Q99592 522 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 SLC12A9Q9BXP2 914 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 UGT2B28Q9BY64 529 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 ULBP3Q9BZM4 244 aa9.94□□□□□ -0.82
COL5A1-202ENST00000371820 BRINP2Q9C0B6 783 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms